Man page - vcfuniq(1)
Packages contas this manual
- vcfgenotypecompare(1)
- vcfprimers(1)
- vcffilter(1)
- vcfannotate(1)
- vcfentropy(1)
- vcfsample2info(1)
- vcflib-api(1)
- vcfcreatemulti(1)
- vcfinfo2qual(1)
- vcfleftalign(1)
- vcfgenotypes(1)
- vcfannotategenotypes(1)
- vcfremovesamples(1)
- vcfoverlay(1)
- vcfgenosamplenames(1)
- vcfbreakmulti(1)
- vcfcleancomplex(1)
- vcfcountalleles(1)
- vcfgeno2haplo(1)
- vcfallelicprimitives(1)
- vcfstats(1)
- vcfnullgenofields(1)
- vcfkeepinfo(1)
- abba-baba(1)
- vcfuniqalleles(1)
- vcfuniq(1)
- vcfkeepgeno(1)
- vcfglbound(1)
- vcfcheck(1)
- vcfqual2info(1)
- vcfrandom(1)
- vcfinfosummarize(1)
- vcfnumalt(1)
- vcfld(1)
- vcfhethomratio(1)
- vcfsamplediff(1)
- vcfindex(1)
- vcf2tsv(1)
- vcfremap(1)
- vcfclassify(1)
- smoother(1)
- vcfstreamsort(1)
- vcfremoveaberrantgenotypes(1)
- vcfsamplenames(1)
- vcfevenregions(1)
- vcfcommonsamples(1)
- vcfgenosummarize(1)
- vcfecho(1)
- vcflength(1)
- pyvcflib(1)
- vcfsitesummarize(1)
- vcfparsealts(1)
- vcfnulldotslashdot(1)
- vcfcombine(1)
- vcflib(1)
- vcf2dag(1)
- vcf2fasta(1)
- vcfglxgt(1)
- vcffixup(1)
- vcfwave(1)
- vcfcat(1)
- vcfintersect(1)
- vcfflatten(1)
- vcfaltcount(1)
- vcfkeepsamples(1)
- vcfdistance(1)
- vcfaddinfo(1)
- vcfgeno2alleles(1)
- vcfrandomsample(1)
- vcfhetcount(1)
- vcfafpath(1)
- vcfroc(1)
Package: libvcflib-tools
apt-get install libvcflib-tools
apt-get install libvcflib-tools
Manuals in package:
Documentations in package:
Manual
| VCFUNIQ(1) | vcfuniq (VCF filter) | VCFUNIQ(1) |
NAME
vcfuniq
SYNOPSIS
vcfuniq
DESCRIPTION
List unique genotypes. Similar to GNU uniq, but aimed at VCF records. vcfuniq removes records which have the same position, ref, and alt as the previous record on a sorted VCF file. Note that it does not adjust/combine genotypes in the output, but simply takes the first record. See also vcfcreatemulti for combining records.
OPTIONS
-
Type: filter
EXIT VALUES
- 0
- Success
- not 0
- Failure
SEE ALSO
vcflib(1)
OTHER
LICENSE
Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.
AUTHORS
Erik Garrison and vcflib contributors.
| vcfuniq (vcflib) |