Man page - pxrmk(1)
Packages contains this manual
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- pxcomp(1)
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- pxrms(1)
- pxfqfilt(1)
- pxt2nex(1)
- pxcltr(1)
- pxlog(1)
- pxmrca(1)
- pxseqgen(1)
- pxbp(1)
- pxnj(1)
- pxsstat(1)
- pxtscale(1)
- pxconsq(1)
- pxs2nex(1)
- pxrls(1)
- pxmrcacut(1)
- pxcolt(1)
- pxboot(1)
apt-get install phyx
Manual
PXRMK
NAMESYNOPSIS
DESCRIPTION
OPTIONS
CITATION
AUTHOR
REPORTING BUGS
COPYRIGHT
NAME
pxrmk - remove two-degree internal nodes from a tree
SYNOPSIS
pxrmk [ OPTIONS ]...
DESCRIPTION
Remove two-degree internal nodes (’knuckles’) from a tree. This will take a newick- or nexus-formatted tree from a file or STDIN. Output is written in newick format.
OPTIONS
-t , --treef = FILE
input tree file, STDIN otherwise
-o , --outf = FILE
output tree file, STOUT otherwise
-h , --help
display this help and exit
-V , --version
display version and exit
-C , --citation
display phyx citation and exit
CITATION
Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.
AUTHOR
Written by Joseph W. Brown, Stephen A. Smith (blackrim)
REPORTING BUGS
Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>
COPYRIGHT
Copyright © 2016-2024 FePhyFoFum License GPLv3