Man page - pxnj(1)
Packages contains this manual
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- pxlog(1)
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- pxseqgen(1)
- pxbp(1)
- pxnj(1)
- pxsstat(1)
- pxtscale(1)
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- pxs2nex(1)
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apt-get install phyx
Manual
PXNJ
NAMESYNOPSIS
DESCRIPTION
OPTIONS
CITATION
AUTHOR
REPORTING BUGS
COPYRIGHT
NAME
pxnj - basic neighbour-joining tree maker
SYNOPSIS
pxnj [ OPTIONS ]...
DESCRIPTION
Basic neighbour-joining tree maker. This will take fasta, fastq, phylip, and nexus inputs from a file or STDIN.
OPTIONS
-s , --seqf = FILE
input sequence file, STDIN otherwise
-n , --nthreads = INT
number of threads, default=1
-o , --outf = FILE
output newick file, STOUT otherwise
-h , --help
display this help and exit
-V , --version
display version and exit
-C , --citation
display phyx citation and exit
CITATION
Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.
AUTHOR
Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)
REPORTING BUGS
Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>
COPYRIGHT
Copyright © 2015-2021 FePhyFoFum License GPLv3