Man page - archive-pids(1)
Packages contains this manual
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apt-get install ncbi-entrez-direct
Manual
ARCHIVE-PIDS
NAMESYNOPSIS
DESCRIPTION
OPTIONS
ENVIRONMENT
SEE ALSO
NAME
archive-pids - maintain a local NCBI PubMed / PubMed Central ID map
SYNOPSIS
archive-pids [[ - ] daily |[ - ][ re ] index ] [[ - ] clean |[ - ] clear |[ - ] scrub | [ - ] scour |[ - ] scratch |[ - ] erase ] [ -ftp | -http [ s ]]
DESCRIPTION
archive-pids prepares a directory to hold a map between PubMed’s article identifiers and PubMed Central’s, then downloads a full database dump and organizes it into an rchive (1) trie.
OPTIONS
[ - ] daily
Additionally produce or update an inverted index.
[ - ][ re ] index
Fully reindex, complete with an inverted index.
[ - ] clean |[ - ] clear |[ - ] scrub |[ - ] scour |[ - ] scratch |[ - ] erase
Delete Scratch directories.
|
-ftp |
Download needed data via FTP (default). |
-http [ s ]
Download needed data via HTTPS.
ENVIRONMENT
EDIRECT_LOCAL_ARCHIVE
Local archive directory to use; expected to hold an absolute path.
EDIRECT_LOCAL_WORKING
Directory to hold intermediate subtrees; expected to hold an absolute path. Defaults to the local archive directory when not set.
SEE ALSO
archive-nihocc (1), archive-nlmnlp (1), archive-nmcds (1), archive-pmc (1), archive-pubmed (1), archive-taxonomy (1), nquire (1), pm-clean (1), pm-prepare (1), pm-setup (1), rchive (1), xfetch (1), xfilter (1), xinfo (1), xlink (1), xsearch (1). xtract (1).