Package - genometools
Package: genometools
apt-get install genometools
apt-get install genometools
Manuals in package:
- gt-scriptfilter(1)
- gt-mmapandread(1)
- gt-gff3(1)
- gt-ltrdigest(1)
- gt-encseq(1)
- gt-extractfeat(1)
- gt-seed_extend(1)
- gt-dupfeat(1)
- gt-csa(1)
- gt-clean(1)
- gt-packedindex(1)
- gt-genomediff(1)
- gt-sketch_page(1)
- gt-compreads-refcompress(1)
- gt-splicesiteinfo(1)
- gt-extractseq(1)
- gt-compreads(1)
- gt-encseq-decode(1)
- gt-cds(1)
- gt-encseq-bitextract(1)
- gt-readjoiner(1)
- gt-tallymer-occratio(1)
- gt-tallymer(1)
- gt-sequniq(1)
- gt-id_to_md5(1)
- gt-readjoiner-prefilter(1)
- gt-seqtranslate(1)
- gt-tallymer-search(1)
- gt-condenseq(1)
- gt-seqmutate(1)
- gt-seqorder(1)
- gt-seq(1)
- gt-inlineseq_add(1)
- gt-repfind(1)
- gt-seqfilter(1)
- gt-sketch(1)
- gt-hop(1)
- gt-seqids(1)
- gt-fastq_sample(1)
- gt-compreads-refdecompress(1)
- gt-readjoiner-assembly(1)
- gt-readjoiner-overlap(1)
- gt-splitfasta(1)
- gt-seqtransform(1)
- gt-tallymer-mkindex(1)
- gt-wtree(1)
- gt-ltrharvest(1)
- gt-chseqids(1)
- gt-compreads-decompress(1)
- gt-orffinder(1)
- gt-encseq-sample(1)
- gt-encseq-md5(1)
- gt-merge(1)
- gt-gff3validator(1)
- gt-matchtool(1)
- gt-congruence(1)
- gt-tagerator(1)
- gt-gff3_to_gtf(1)
- gt-featureindex(1)
- gt-md5_to_id(1)
- gt-mkfeatureindex(1)
- gt-tirvish(1)
- gt-snpper(1)
- gt-prebwt(1)
- gt-stat(1)
- gt-speck(1)
- gt-convertseq(1)
- gt-compreads-compress(1)
- gt-interfeat(1)
- gt-chain2dim(1)
- gt-encseq-bench(1)
- gt-shulengthdist(1)
- gt-encseq-encode(1)
- gt-select(1)
- gt-uniq(1)
- gt-shredder(1)
- gt-fingerprint(1)
- gt-matstat(1)
- gt-encseq-info(1)
- gt-congruence-spacedseed(1)
- gt-encseq2spm(1)
- gt-simreads(1)
- gt(1)
- gt-dot(1)
- gt-ltrclustering(1)
- gt-seqstat(1)
- gt-mergefeat(1)
- gt-bed_to_gff3(1)
- gt-uniquesub(1)
- gt-gtf_to_gff3(1)
- gt-eval(1)
- gt-encseq-check(1)
- gt-loccheck(1)
- gt-inlineseq_split(1)
Documentations in package:
Primary informations
Download package: http://deb.debian.org/debian/pool/main/g/genometools/genometools_1.6.5+ds-2.2_amd64.deb (Size: 1.6MiB)| Property | Value |
|---|---|
| Package | genometools |
| Version | 1.6.5+ds-2.2 |
| Installed-Size | 4292 |
| Maintainer | Debian Med Packaging Team |
| Architecture | amd64 |
| Depends | libbz2-1.0, libc6 (>= 2.34), libcairo2 (>= 1.2.4), libexpat1 (>= 2.0.1), libglib2.0-0t64 (>= 2.12.0), liblua5.1-0, libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libsqlite3-0 (>= 3.5.9), libtre5 (>= 0.8.0), lua-filesystem (>= 1.8.0), lua-lpeg (>= 1.0.2), lua-md5, zlib1g (>= 1:1.2.3.3), genometools-common |
| Description | versatile genome analysis toolkit |
| Description-md5 | 00c8a03659977f199801c7a670b057b3 |
| Homepage | http://genometools.org |
| Tag | field::biology, field::biology:bioinformatics, implemented-in::c, implemented-in::lua, interface::commandline, role::program, uitoolkit::ncurses |
| Section | science |
| Priority | optional |
| Filename | pool/main/g/genometools/genometools_1.6.5+ds-2.2_amd64.deb |
| Size | 1656240 |
| MD5sum | 5c761b9f6b875ca987063220a5b01aa3 |
| SHA256 | fc9a991476f56ab1daadd8d01b54c0c07c8d1e2dc52a568bcd8445af8819ace3 |
Files in package
- /usr/bin/gt
- /usr/share/doc/genometools/CONTRIBUTORS
- /usr/share/doc/genometools/VERSION
- /usr/share/doc/genometools/changelog.Debian.gz
- /usr/share/doc/genometools/changelog.gz
- /usr/share/doc/genometools/copyright
- /usr/share/man/man1/gt-bed_to_gff3.1.gz
- /usr/share/man/man1/gt-cds.1.gz
- /usr/share/man/man1/gt-chain2dim.1.gz
- /usr/share/man/man1/gt-chseqids.1.gz
- /usr/share/man/man1/gt-clean.1.gz
- /usr/share/man/man1/gt-compreads-compress.1.gz
- /usr/share/man/man1/gt-compreads-decompress.1.gz
- /usr/share/man/man1/gt-compreads-refcompress.1.gz
- /usr/share/man/man1/gt-compreads-refdecompress.1.gz
- /usr/share/man/man1/gt-compreads.1.gz
- /usr/share/man/man1/gt-condenseq.1.gz
- /usr/share/man/man1/gt-congruence-spacedseed.1.gz
- /usr/share/man/man1/gt-congruence.1.gz
- /usr/share/man/man1/gt-convertseq.1.gz
- /usr/share/man/man1/gt-csa.1.gz
- /usr/share/man/man1/gt-dot.1.gz
- /usr/share/man/man1/gt-dupfeat.1.gz
- /usr/share/man/man1/gt-encseq-bench.1.gz
- /usr/share/man/man1/gt-encseq-bitextract.1.gz
- /usr/share/man/man1/gt-encseq-check.1.gz
- /usr/share/man/man1/gt-encseq-decode.1.gz
- /usr/share/man/man1/gt-encseq-encode.1.gz
- /usr/share/man/man1/gt-encseq-info.1.gz
- /usr/share/man/man1/gt-encseq-md5.1.gz
- /usr/share/man/man1/gt-encseq-sample.1.gz
- /usr/share/man/man1/gt-encseq.1.gz
- /usr/share/man/man1/gt-encseq2spm.1.gz
- /usr/share/man/man1/gt-eval.1.gz
- /usr/share/man/man1/gt-extractfeat.1.gz
- /usr/share/man/man1/gt-extractseq.1.gz
- /usr/share/man/man1/gt-fastq_sample.1.gz
- /usr/share/man/man1/gt-featureindex.1.gz
- /usr/share/man/man1/gt-fingerprint.1.gz
- /usr/share/man/man1/gt-genomediff.1.gz
- /usr/share/man/man1/gt-gff3.1.gz
- /usr/share/man/man1/gt-gff3_to_gtf.1.gz
- /usr/share/man/man1/gt-gff3validator.1.gz
- /usr/share/man/man1/gt-gtf_to_gff3.1.gz
- /usr/share/man/man1/gt-hop.1.gz
- /usr/share/man/man1/gt-id_to_md5.1.gz
- /usr/share/man/man1/gt-inlineseq_add.1.gz
- /usr/share/man/man1/gt-inlineseq_split.1.gz
- /usr/share/man/man1/gt-interfeat.1.gz
- /usr/share/man/man1/gt-loccheck.1.gz
- /usr/share/man/man1/gt-ltrclustering.1.gz
- /usr/share/man/man1/gt-ltrdigest.1.gz
- /usr/share/man/man1/gt-ltrharvest.1.gz
- /usr/share/man/man1/gt-matchtool.1.gz
- /usr/share/man/man1/gt-matstat.1.gz
- /usr/share/man/man1/gt-md5_to_id.1.gz
- /usr/share/man/man1/gt-merge.1.gz
- /usr/share/man/man1/gt-mergefeat.1.gz
- /usr/share/man/man1/gt-mkfeatureindex.1.gz
- /usr/share/man/man1/gt-mmapandread.1.gz
- /usr/share/man/man1/gt-orffinder.1.gz
- /usr/share/man/man1/gt-packedindex.1.gz
- /usr/share/man/man1/gt-prebwt.1.gz
- /usr/share/man/man1/gt-readjoiner-assembly.1.gz
- /usr/share/man/man1/gt-readjoiner-overlap.1.gz
- /usr/share/man/man1/gt-readjoiner-prefilter.1.gz
- /usr/share/man/man1/gt-readjoiner.1.gz
- /usr/share/man/man1/gt-repfind.1.gz
- /usr/share/man/man1/gt-scriptfilter.1.gz
- /usr/share/man/man1/gt-seed_extend.1.gz
- /usr/share/man/man1/gt-select.1.gz
- /usr/share/man/man1/gt-seq.1.gz
- /usr/share/man/man1/gt-seqfilter.1.gz
- /usr/share/man/man1/gt-seqids.1.gz
- /usr/share/man/man1/gt-seqmutate.1.gz
- /usr/share/man/man1/gt-seqorder.1.gz
- /usr/share/man/man1/gt-seqstat.1.gz
- /usr/share/man/man1/gt-seqtransform.1.gz
- /usr/share/man/man1/gt-seqtranslate.1.gz
- /usr/share/man/man1/gt-sequniq.1.gz
- /usr/share/man/man1/gt-shredder.1.gz
- /usr/share/man/man1/gt-shulengthdist.1.gz
- /usr/share/man/man1/gt-simreads.1.gz
- /usr/share/man/man1/gt-sketch.1.gz
- /usr/share/man/man1/gt-sketch_page.1.gz
- /usr/share/man/man1/gt-snpper.1.gz
- /usr/share/man/man1/gt-speck.1.gz
- /usr/share/man/man1/gt-splicesiteinfo.1.gz
- /usr/share/man/man1/gt-splitfasta.1.gz
- /usr/share/man/man1/gt-stat.1.gz
- /usr/share/man/man1/gt-tagerator.1.gz
- /usr/share/man/man1/gt-tallymer-mkindex.1.gz
- /usr/share/man/man1/gt-tallymer-occratio.1.gz
- /usr/share/man/man1/gt-tallymer-search.1.gz
- /usr/share/man/man1/gt-tallymer.1.gz
- /usr/share/man/man1/gt-tirvish.1.gz
- /usr/share/man/man1/gt-uniq.1.gz
- /usr/share/man/man1/gt-uniquesub.1.gz
- /usr/share/man/man1/gt-wtree.1.gz
- /usr/share/man/man1/gt.1.gz