Man page - gt-sequniq(1)
Packages contains this manual
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apt-get install genometools
Manual
GT-SEQUNIQ
NAMESYNOPSIS
DESCRIPTION
REPORTING BUGS
NAME
gt-sequniq - Filter out repeated sequences in given sequence files.
SYNOPSIS
gt sequniq [option ...] sequence_file [...]
DESCRIPTION
-rev [ yes|no ]
also filter out sequences whose reverse complement is identical to a sequence already output (default: no)
-v [ yes|no ]
be verbose (default: no)
-width [ value ]
set output width for FASTA sequence printing (0 disables formatting) (default: 0)
-o [ filename ]
redirect output to specified file (default: undefined)
-gzip [ yes|no ]
write gzip compressed output file (default: no)
-bzip2 [ yes|no ]
write bzip2 compressed output file (default: no)
-force [ yes|no ]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
The tool will only remove identical duplicates of sequences, not substrings contained within other sequences.
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.