Package - bioperl

Package: bioperl
apt-get install bioperl

Manuals in package:

Documentations in package:

bioperl

Primary informations

Download package: http://deb.debian.org/debian/pool/main/b/bioperl/bioperl_1.7.8-1_all.deb (Size: 240.7KiB)

Property	Value
Package	bioperl
Version	1.7.8-1
Installed-Size	685
Maintainer	Debian Med Packaging Team
Architecture	all
Depends	libbio-perl-perl (= 1.7.8-1), perl:any, libtest-most-perl
Recommends	bioperl-run, perl-doc, libhttp-message-perl, libwww-perl, libcache-cache-perl, libbio-perl-run-perl, libdbi-perl, libgd-gd2-perl, libapache-dbi-perl, liburi-perl, libxml-simple-perl, libyaml-perl, libace-perl, liblist-moreutils-perl, libxml-twig-perl, libset-scalar-perl
Suggests	groff-base
Description	Perl tools for computational molecular biology
Description-md5	499a31b1d7a9f73ed26eb29f5425ebf8
Homepage	http://www.bioperl.org/
Tag	devel::lang:perl, devel::library, field::biology, field::biology:bioinformatics, implemented-in::perl, role::devel-lib, role::shared-lib
Section	science
Priority	optional
Filename	pool/main/b/bioperl/bioperl_1.7.8-1_all.deb
Size	246472
MD5sum	9b87ce228d95907c6d20b2fda5a36215
SHA256	698f12a01e7176edb102e7b376fc5301d129a389bea64467358fe6121206c433

Files in package

/usr/bin/bp_aacomp
/usr/bin/bp_bioflat_index
/usr/bin/bp_biogetseq
/usr/bin/bp_dbsplit
/usr/bin/bp_extract_feature_seq
/usr/bin/bp_fastam9_to_table
/usr/bin/bp_fetch
/usr/bin/bp_filter_search
/usr/bin/bp_find-blast-matches
/usr/bin/bp_gccalc
/usr/bin/bp_genbank2gff3
/usr/bin/bp_index
/usr/bin/bp_local_taxonomydb_query
/usr/bin/bp_make_mrna_protein
/usr/bin/bp_mask_by_search
/usr/bin/bp_mrtrans
/usr/bin/bp_mutate
/usr/bin/bp_nexus2nh
/usr/bin/bp_nrdb
/usr/bin/bp_oligo_count
/usr/bin/bp_process_gadfly
/usr/bin/bp_process_sgd
/usr/bin/bp_revtrans-motif
/usr/bin/bp_search2alnblocks
/usr/bin/bp_search2gff
/usr/bin/bp_search2table
/usr/bin/bp_search2tribe
/usr/bin/bp_seq_length
/usr/bin/bp_seqconvert
/usr/bin/bp_seqcut
/usr/bin/bp_seqpart
/usr/bin/bp_seqret
/usr/bin/bp_seqretsplit
/usr/bin/bp_split_seq
/usr/bin/bp_sreformat
/usr/bin/bp_taxid4species
/usr/bin/bp_taxonomy2tree
/usr/bin/bp_translate_seq
/usr/bin/bp_tree2pag
/usr/bin/bp_unflatten_seq
/usr/share/doc/bioperl/AUTHORS.gz
/usr/share/doc/bioperl/README.md
/usr/share/doc/bioperl/changelog.Debian.gz
/usr/share/doc/bioperl/changelog.gz
/usr/share/doc/bioperl/copyright
/usr/share/doc/bioperl/examples/Bio-DB-GFF/load_ucsc.pl
/usr/share/doc/bioperl/examples/align/FastAlign.pl
/usr/share/doc/bioperl/examples/align/align_on_codons.pl
/usr/share/doc/bioperl/examples/align/aligntutorial.pl
/usr/share/doc/bioperl/examples/align/simplealign.pl
/usr/share/doc/bioperl/examples/classify_hits_kingdom
/usr/share/doc/bioperl/examples/contributed/nmrpdb_parse.pl
/usr/share/doc/bioperl/examples/contributed/prosite2perl.pl
/usr/share/doc/bioperl/examples/contributed/rebase2list.pl
/usr/share/doc/bioperl/examples/db/est_tissue_query.pl
/usr/share/doc/bioperl/examples/db/get_seqs.pl
/usr/share/doc/bioperl/examples/db/rfetch.pl
/usr/share/doc/bioperl/examples/db/use_registry.pl
/usr/share/doc/bioperl/examples/generate_random_seq.pl
/usr/share/doc/bioperl/examples/longorf.pl
/usr/share/doc/bioperl/examples/make_primers.pl
/usr/share/doc/bioperl/examples/quality/svgtrace.pl
/usr/share/doc/bioperl/examples/rev_and_trans.pl
/usr/share/doc/bioperl/examples/revcom_dir.pl
/usr/share/doc/bioperl/examples/root/README
/usr/share/doc/bioperl/examples/root/exceptions1.pl
/usr/share/doc/bioperl/examples/root/exceptions2.pl
/usr/share/doc/bioperl/examples/root/exceptions3.pl
/usr/share/doc/bioperl/examples/root/exceptions4.pl
/usr/share/doc/bioperl/examples/searchio/blast_example.pl
/usr/share/doc/bioperl/examples/searchio/custom_writer.pl
/usr/share/doc/bioperl/examples/searchio/hitwriter.pl
/usr/share/doc/bioperl/examples/searchio/hspwriter.pl
/usr/share/doc/bioperl/examples/searchio/htmlwriter.pl
/usr/share/doc/bioperl/examples/searchio/psiblast_features.pl
/usr/share/doc/bioperl/examples/searchio/psiblast_iterations.pl
/usr/share/doc/bioperl/examples/searchio/rawwriter.pl
/usr/share/doc/bioperl/examples/searchio/resultwriter.pl
/usr/share/doc/bioperl/examples/searchio/waba2gff.pl
/usr/share/doc/bioperl/examples/searchio/waba2gff3.pl
/usr/share/doc/bioperl/examples/tk/gsequence.pl
/usr/share/doc/bioperl/examples/tk/hitdisplay.pl
/usr/share/doc/bioperl/examples/tools/extract_genes.pl
/usr/share/doc/bioperl/examples/tools/gb_to_gff.pl
/usr/share/doc/bioperl/examples/tools/gff2ps.pl
/usr/share/doc/bioperl/examples/tools/parse_codeml.pl
/usr/share/doc/bioperl/examples/tools/reverse-translate.pl
/usr/share/doc/bioperl/examples/tools/run_genscan.pl
/usr/share/doc/bioperl/examples/tools/run_primer3.pl
/usr/share/doc/bioperl/examples/tools/seq_pattern.pl
/usr/share/doc/bioperl/examples/tools/standaloneblast.pl
/usr/share/doc/bioperl/examples/tree/paup2phylip.pl
/usr/share/man/man1/bp_aacomp.1p.gz
/usr/share/man/man1/bp_bioflat_index.1p.gz
/usr/share/man/man1/bp_biogetseq.1p.gz
/usr/share/man/man1/bp_dbsplit.1p.gz
/usr/share/man/man1/bp_extract_feature_seq.1p.gz
/usr/share/man/man1/bp_fastam9_to_table.1p.gz
/usr/share/man/man1/bp_fetch.1p.gz
/usr/share/man/man1/bp_filter_search.1p.gz
/usr/share/man/man1/bp_find-blast-matches.1p.gz
/usr/share/man/man1/bp_gccalc.1p.gz
/usr/share/man/man1/bp_genbank2gff3.1p.gz
/usr/share/man/man1/bp_index.1p.gz
/usr/share/man/man1/bp_local_taxonomydb_query.1p.gz
/usr/share/man/man1/bp_make_mrna_protein.1p.gz
/usr/share/man/man1/bp_mask_by_search.1p.gz
/usr/share/man/man1/bp_mrtrans.1p.gz
/usr/share/man/man1/bp_mutate.1p.gz
/usr/share/man/man1/bp_nexus2nh.1p.gz
/usr/share/man/man1/bp_nrdb.1p.gz
/usr/share/man/man1/bp_oligo_count.1p.gz
/usr/share/man/man1/bp_process_gadfly.1p.gz
/usr/share/man/man1/bp_process_sgd.1p.gz
/usr/share/man/man1/bp_revtrans-motif.1p.gz
/usr/share/man/man1/bp_search2alnblocks.1p.gz
/usr/share/man/man1/bp_search2gff.1p.gz
/usr/share/man/man1/bp_search2table.1p.gz
/usr/share/man/man1/bp_search2tribe.1p.gz
/usr/share/man/man1/bp_seq_length.1p.gz
/usr/share/man/man1/bp_seqconvert.1p.gz
/usr/share/man/man1/bp_seqcut.1p.gz
/usr/share/man/man1/bp_seqpart.1p.gz
/usr/share/man/man1/bp_seqret.1p.gz
/usr/share/man/man1/bp_seqretsplit.1p.gz
/usr/share/man/man1/bp_split_seq.1p.gz
/usr/share/man/man1/bp_sreformat.1p.gz
/usr/share/man/man1/bp_taxid4species.1p.gz
/usr/share/man/man1/bp_taxonomy2tree.1p.gz
/usr/share/man/man1/bp_translate_seq.1p.gz
/usr/share/man/man1/bp_tree2pag.1p.gz
/usr/share/man/man1/bp_unflatten_seq.1p.gz