Man page - bp_mutate(1)

Packages contas this manual

Package:  bioperl
apt-get install bioperl

Manuals in package:
• bp_process_sgd(1)
• bp_genbank2gff3(1)
• bp_make_mrna_protein(1)
• bp_search2alnblocks(1)
• bp_seqret(1)
• bp_fetch(1)
• bp_seqretsplit(1)
• bp_mrtrans(1)
• bp_index(1)
• bp_extract_feature_seq(1)
• bp_seqcut(1)
• bp_nexus2nh(1)
• bp_aacomp(1)
• bp_gccalc(1)
• bp_unflatten_seq(1)
• bp_local_taxonomydb_query(1)
• bp_dbsplit(1)
• bp_process_gadfly(1)
• bp_oligo_count(1)
• bp_nrdb(1)
• bp_seqpart(1)
• bp_tree2pag(1)
• bp_taxonomy2tree(1)
• bp_filter_search(1)
• bp_bioflat_index(1)
• bp_taxid4species(1)
• bp_split_seq(1)
• bp_find-blast-matches(1)
• bp_mask_by_search(1)
• bp_mutate(1)
• bp_seqconvert(1)
• bp_search2gff(1)
• bp_fastam9_to_table(1)
• bp_seq_length(1)
• bp_biogetseq(1)
• bp_translate_seq(1)
• bp_search2table(1)
• bp_sreformat(1)
• bp_revtrans-motif(1)
• bp_search2tribe(1)
Documentations in package:
• bioperl

Manual

  ./bp_mutate.pl -p 25 -i test.fa -n 5 -f swiss -o muts.swiss
  #or
  ./bp_mutate.pl --percent=25 --input=test.fa --number=5 -output=x.fa

  -h|--help    Help
  -p|--percent Percent mutagenized
  -n|--number  Number of mutant sequences created
  -o|--output  Output file (optional)
  -f|--format  Output format (default: fasta)
  -i|--input   Input file

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

  https://github.com/bioperl/bioperl-live/issues