Man page - bp_filter_search(1)

Packages contains this manual

Package:  bioperl
apt-get install bioperl

Manuals in package:
• bp_extract_feature_seq(1)
• bp_index(1)
• bp_taxid4species(1)
• bp_aacomp(1)
• bp_seqpart(1)
• bp_search2tribe(1)
• bp_dbsplit(1)
• bp_taxonomy2tree(1)
• bp_mutate(1)
• bp_process_gadfly(1)
• bp_find-blast-matches(1)
• bp_nexus2nh(1)
• bp_search2alnblocks(1)
• bp_biogetseq(1)
• bp_unflatten_seq(1)
• bp_fastam9_to_table(1)
• bp_tree2pag(1)
• bp_gccalc(1)
• bp_sreformat(1)
• bp_split_seq(1)
• bp_seqretsplit(1)
• bp_process_sgd(1)
• bp_make_mrna_protein(1)
• bp_revtrans-motif(1)
• bp_mask_by_search(1)
• bp_seqcut(1)
• bp_mrtrans(1)
• bp_seqret(1)
• bp_filter_search(1)
• bp_nrdb(1)
• bp_seqconvert(1)
• bp_search2gff(1)
• bp_bioflat_index(1)
• bp_oligo_count(1)
• bp_search2table(1)
• bp_genbank2gff3(1)
• bp_translate_seq(1)
• bp_local_taxonomydb_query(1)
• bp_fetch(1)
• bp_seq_length(1)
Documentations in package:
• bioperl

Manual

BP_FILTER_SEARCH

NAME
SYNOPSIS
DESCRIPTION
FEEDBACK
Mailing Lists
Reporting Bugs
AUTHOR

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NAME

bp_filter_search - filters searchio results, outputting a tab delimited summary

SYNOPSIS

#bp_filter_search -format blast -score 200 < search.bl > search.tab

DESCRIPTION

This script filters searchio results allowing a number of different filters to be applied before outputting to stdout in a tab delimited format.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:

https://github.com/bioperl/bioperl-live/issues

AUTHOR

Ewan Birney <birney@ebi.ac.uk>

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