Man page - trees-to-srq(1)
Packages contas this manual
- alignment-distances(1)
- alignment-max(1)
- bali-phy(1)
- tree-mean-lengths(1)
- mcon-tool(1)
- extract-ancestors(1)
- cut-range(1)
- alignment-indices(1)
- alignment-thin(1)
- stats-select(1)
- pickout(1)
- trees-consensus(1)
- alignment-gild(1)
- alignment-chop-internal(1)
- summarize-ancestors(1)
- draw-tree(1)
- bali-phy-pkg(1)
- mctree-mean-lengths(1)
- tree-tool(1)
- alignment-find(1)
- trees-bootstrap(1)
- alignment-translate(1)
- trees-distances(1)
- alignment-cat(1)
- statreport(1)
- bp-analyze(1)
- alignment-info(1)
- alignment-draw(1)
- alignments-diff(1)
- alignment-consensus(1)
- bali-subsample(1)
Package: bali-phy
apt-get install bali-phy
apt-get install bali-phy
Manuals in package:
Documentations in package:
Manual
| tree-to-srq(1) | tree-to-srq(1) |
NAME
tree-to-srq - Generate Scaled Regeneration Quantile (SRQ) plot
SYNOPSIS
tree-to-srq predicates-file sampled-trees [sampled-trees ...]
DESCRIPTION
Generate Scaled Regeneration Quantile (SRQ) plot
ALLOWED OPTIONS:
- -h, –help
- produce help message
- –files arg
- tree samples to examine
- –predicates arg
- predicates to examine
- -s arg (=10%), –skip arg (=10%)
- Number of trees to skip.
- -x arg (=1), –subsample arg (=1)
- factor by which to sub-sample
- -u arg, –until arg
- Read until this number of trees.
- –max-points arg
- maximum number of points to record
- –mode arg (=SRQ)
- SRQ, sum, or values
- –invert
- consider the inverse of each event instead
- –no-scale-x
- don’t scale X
- –no-scale-y
- don’t scale Y
REPORTING BUGS:
BAli-Phy online help: http://www.bali-phy.org/docs.php.
Please send bug reports to bali-phy-users@googlegroups.com.
AUTHORS
Benjamin Redelings.
| Feb 2018 |