Man page - draw-tree(1)

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Package: bali-phy
apt-get install bali-phy

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draw-tree(1)

draw-tree - Draw NEWICK (and some other) formatted files.

draw-tree [OPTIONS] tree file

Draw NEWICK (and some other) formatted files.

-h, –help: Produce help message
-W arg (=8.5), –width arg (=8.5): Page width in inches
-H arg (=11), –height arg (=11): Page height in inches
–file arg: predicates to examine
–output arg (=pdf): Type of output to write: tree, topology, mtree, lengths, dot, ps, pdf, svg
–out arg: Output filename (without extension)
–full: Consider only full splits by collapsing any partial splits.
–iterations arg (=2): Number of iterations for layout algorithm
–font-size arg (=10): Font size for taxon names
–angle_iterations arg (=0): Number of iterations for layout algorithm with small-angle penalties
–labels arg (=horizontal): Are the names horizontal or angled?
–collapse: Give node lengths evenly to neighboring branches and zero the node lengths.
–layout arg (=graph): Layout method: graph, equal-angle, equal-daylight, etc.
–greedy: For equal-daylight layout: take as much daylight as possible?
–tree-layout-initial: Start an energy layout with positions from the equal-angle layout - only for multifurcating trees
–no-shade: For equal-daylight layout: reject rotations that shade other groups?
–draw-clouds arg: Draw wandering-ranges in MC trees as clouds.
–seed arg: Random seed
–verbose: Output more log messages on stderr.

Benjamin Redelings.

Feb 2018