Man page - alignment-chop-internal(1)
Packages contains this manual
- alignment-consensus(1)
- cut-range(1)
- alignment-thin(1)
- alignment-max(1)
- bali-phy-pkg(1)
- bp-analyze(1)
- alignment-draw(1)
- summarize-ancestors(1)
- extract-ancestors(1)
- stats-select(1)
- mctree-mean-lengths(1)
- trees-consensus(1)
- alignment-find(1)
- bali-phy(1)
- statreport(1)
- alignment-indices(1)
- tree-mean-lengths(1)
- pickout(1)
- draw-tree(1)
- alignment-gild(1)
- alignment-distances(1)
- alignment-info(1)
- tree-tool(1)
- alignments-diff(1)
- trees-bootstrap(1)
- mcon-tool(1)
- alignment-cat(1)
- alignment-chop-internal(1)
- alignment-translate(1)
- trees-distances(1)
- bali-subsample(1)
Package: bali-phy
apt-get install bali-phy
apt-get install bali-phy
Manuals in package:
Documentations in package:
Manual
alignment-chop-internal
NAMESYNOPSIS
DESCRIPTION
ALLOWED OPTIONS:
REPORTING BUGS:
AUTHORS
NAME
alignment-chop-internal - Remove ancestral sequences from an alignment.
SYNOPSIS
alignment-chop-internal [OPTIONS] < alignments-file
DESCRIPTION
Remove ancestral sequences from an alignment.
ALLOWED OPTIONS:
-h , –help
produce help message
–align arg
file with sequences and initial alignment
–alphabet arg
set to ‘Codons’ to prefer codon alphabets
–tree arg
file with tree that specifies leaves to keep
-N arg , –nleaves arg
number of sequences to keep
REPORTING BUGS:
BAli-Phy online help: http://www.bali-phy.org/docs.php .
Please send bug reports to bali-phy-users@googlegroups.com .
AUTHORS
Benjamin Redelings.