Man page - cmtk-split(1)
Packages contains this manual
- cmtk-concat_affine(1)
- cmtk-overlap(1)
- cmtk-pxsearch(1)
- cmtk-vol2csv(1)
- cmtk-convert_warp(1)
- cmtk-unsplit(1)
- cmtk-reorient(1)
- cmtk-imagemath(1)
- cmtk-vtkxform(1)
- cmtk-regress(1)
- cmtk-film(1)
- cmtk-mcwarp(1)
- cmtk-probe(1)
- cmtk-detect_adni_phantom(1)
- cmtk-xform2itk(1)
- cmtk-asegment(1)
- cmtk-average_images(1)
- cmtk-xform2dfield(1)
- cmtk-levelset(1)
- cmtk-fit_spline_dfield(1)
- cmtk-xform2scalar(1)
- cmtk-hausdorff(1)
- cmtk-asegment_sri24(1)
- cmtk-gmm(1)
- cmtk-reformatx(1)
- cmtk-fit_affine_xform(1)
- cmtk-mk_phantom_3d(1)
- cmtk-fit_affine_xform_landmarks(1)
- cmtk-interleaved_bad_slices(1)
- cmtk-gregxform(1)
- cmtk-split(1)
- cmtk-volume_reconstruction(1)
- cmtk-mat2dof(1)
- cmtk-dcm2image(1)
- cmtk-groupwise_affine(1)
- cmtk-groupwise_init(1)
- cmtk-mk_adni_phantom(1)
- cmtk-mk_analyze_hdr(1)
- cmtk-mcaffine(1)
- cmtk-statistics(1)
- cmtk-geomatch(1)
- cmtk-iterative_shape_averaging(1)
- cmtk-registration(1)
- cmtk-describe(1)
- cmtk-dbtool(1)
- cmtk-detect_spheres_matched_filter(1)
- cmtk-streamxform(1)
- cmtk-mk_nifti_hdr(1)
- cmtk-sequence(1)
- cmtk-jidb(1)
- cmtk-histogram(1)
- cmtk-groupwise_warp(1)
- cmtk-epiunwarp(1)
- cmtk-volume_injection(1)
- cmtk-sba(1)
- cmtk-avg_adm(1)
- cmtk-glm(1)
- cmtk-warpx(1)
- cmtk-make_initial_affine(1)
- cmtk-fit_spline_xform(1)
- cmtk-destripe(1)
- cmtk-fit_affine_dfield(1)
- cmtk-convertx(1)
- cmtk-warp(1)
- cmtk-fibxform(1)
- cmtk-sbai(1)
- cmtk-unwarp_image_phantom(1)
- cmtk-ttest(1)
- cmtk-lvote(1)
- cmtk-dwi_mask_bad_slices(1)
- cmtk-average_labels(1)
- cmtk-lmsba(1)
- cmtk-fib2image(1)
- cmtk-average_affine(1)
- cmtk-similarity(1)
- cmtk-mrbias(1)
- cmtk-stream_pixels(1)
- cmtk-filter(1)
- cmtk-sympl(1)
- cmtk-registrationx(1)
- cmtk-lsba(1)
- cmtk(1)
- cmtk-dof2mat(1)
- cmtk-symplx(1)
- cmtk-warp2ps(1)
apt-get install cmtk
Manual
split
NAMESYNOPSIS
DESCRIPTION
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
Orientation Options
Splitting Options
Output Options
AUTHORS
LICENSE
BUGS
ACKNOWLEDGMENTS
NAME
split - Split images
SYNOPSIS
split InputImage OutputImagePattern
DESCRIPTION
Split volume image into sub-images, i.e., to separate interleaved images into passes
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in ’nroff’ markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose , -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).
Orientation Options
--slice-orientation
Define slice axis for
splitting. Supported values: "axial",
"sagittal", "coronal",
"interleave-x", "interleave-y",
"interleave-z", where the default is
"axial", or use one of the following:
--axial
,
-a
Interleaved axial images [This is the default]
--sagittal , -s
Interleaved sagittal images
--coronal , -c
Interleaved coronal images
--interleave-x , -x
Interleaved along x axis
--interleave-y , -y
Interleaved along y axis
--interleave-z , -z
Interleaved along z axis [This is the default]
Splitting Options
--factor <integer> , -f <integer>
Interleave factor. This is the number of subimages generated. If this is set to zero, a separate 2D output image is generated for each slice in the input (in the given slice orientation). [Default: 2]
Output Options
--padded , -p
Padded output, i.e., fill in removed slices
--output-xform-path <string>
Optional path template (fprintf-style) for output affine transformation that maps input image coordinates to each output image. [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.