Man page - cmtk-sequence(1)
Packages contas this manual
- cmtk-lvote(1)
- cmtk-hausdorff(1)
- cmtk-pxsearch(1)
- cmtk-sba(1)
- cmtk-filter(1)
- cmtk-mk_analyze_hdr(1)
- cmtk-mcwarp(1)
- cmtk-groupwise_warp(1)
- cmtk-split(1)
- cmtk-describe(1)
- cmtk-interleaved_bad_slices(1)
- cmtk-concat_affine(1)
- cmtk-lsba(1)
- cmtk-volume_injection(1)
- cmtk-vtkxform(1)
- cmtk-probe(1)
- cmtk-groupwise_init(1)
- cmtk-fit_affine_xform(1)
- cmtk-reformatx(1)
- cmtk-sympl(1)
- cmtk-fibxform(1)
- cmtk-mk_phantom_3d(1)
- cmtk-geomatch(1)
- cmtk-dof2mat(1)
- cmtk-warp(1)
- cmtk-levelset(1)
- cmtk-unwarp_image_phantom(1)
- cmtk-overlap(1)
- cmtk-epiunwarp(1)
- cmtk-convert_warp(1)
- cmtk-asegment_sri24(1)
- cmtk-fit_affine_xform_landmarks(1)
- cmtk-warp2ps(1)
- cmtk-similarity(1)
- cmtk-reorient(1)
- cmtk-avg_adm(1)
- cmtk-stream_pixels(1)
- cmtk-xform2itk(1)
- cmtk-average_labels(1)
- cmtk-mk_nifti_hdr(1)
- cmtk-convertx(1)
- cmtk-registration(1)
- cmtk-histogram(1)
- cmtk-mcaffine(1)
- cmtk-fit_spline_xform(1)
- cmtk-jidb(1)
- cmtk-gmm(1)
- cmtk-vol2csv(1)
- cmtk-mk_adni_phantom(1)
- cmtk-fit_spline_dfield(1)
- cmtk-symplx(1)
- cmtk-destripe(1)
- cmtk-imagemath(1)
- cmtk-gregxform(1)
- cmtk-fib2image(1)
- cmtk-average_affine(1)
- cmtk-dbtool(1)
- cmtk-unsplit(1)
- cmtk-registrationx(1)
- cmtk-xform2dfield(1)
- cmtk-groupwise_affine(1)
- cmtk-fit_affine_dfield(1)
- cmtk-lmsba(1)
- cmtk-asegment(1)
- cmtk-statistics(1)
- cmtk-film(1)
- cmtk-ttest(1)
- cmtk-dcm2image(1)
- cmtk-sequence(1)
- cmtk-streamxform(1)
- cmtk-glm(1)
- cmtk-volume_reconstruction(1)
- cmtk-warpx(1)
- cmtk-mrbias(1)
- cmtk-xform2scalar(1)
- cmtk-detect_adni_phantom(1)
- cmtk(1)
- cmtk-dwi_mask_bad_slices(1)
- cmtk-make_initial_affine(1)
- cmtk-regress(1)
- cmtk-detect_spheres_matched_filter(1)
- cmtk-iterative_shape_averaging(1)
- cmtk-mat2dof(1)
- cmtk-average_images(1)
- cmtk-sbai(1)
Package: cmtk
apt-get install cmtk
apt-get install cmtk
Manuals in package:
Documentations in package:
Manual
| sequence(1) | The Computational Morphometry Toolkit | sequence(1) |
NAME
sequence - Value sequence
DESCRIPTION
Analyze sequence of numerical values, which is read from standard input
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
- --help
- Write list of basic command line options to standard output.
- --help-all
- Write complete list of basic and advanced command line options to standard output.
- --wiki
- Write list of command line options to standard output in MediaWiki markup.
- --man
- Write man page source in 'nroff' markup to standard output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for backward compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads and OpenMP).
Main Options
- --thresh <double>, -t <double>
- Maximum value threshold. All values above are ignored. [Default: disabled]
- --abs, -a
- Use absolute values.
Histogram Options
- --histogram-min <double>
- Minimum of the histogram value range. All values below this will be counted in the first histogram bin. [Default: disabled]
- --histogram-max <double>
- Maximum of the histogram value range. All values above this will be counted in the last histogram bin. [Default: disabled]
- --histogram-bins <integer>
- Number of histogram bins. [Default: 1000]
Output Options
- --format <string>, -f <string>
- Output number format in printf() style. [Default: %.6f ]
- --write-histogram <string>
- Path for optional histogram output in comma-separated (CSV) format. [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.
| Feb 26 2025 | CMTK 3.3.1p2 |