Package - seqan-apps

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/seqan2/seqan-apps_2.4.0+dfsg-16_amd64.deb (Size: 11.7MiB)

Property	Value
Package	seqan-apps
Source	seqan2
Version	2.4.0+dfsg-16
Installed-Size	75772
Maintainer	Debian Med Packaging Team
Architecture	amd64
Depends	libbz2-1.0, libc6 (>= 2.34), libgcc-s1 (>= 3.4), libgomp1 (>= 6), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4)
Suggests	cwltool | cwl-runner
Description	C++ library for the analysis of biological sequences
Description-md5	131f005def998f24efb83c06d39ac7f6
Homepage	https://www.seqan.de/
Tag	devel::library, role::devel-lib
Section	science
Priority	optional
Filename	pool/main/s/seqan2/seqan-apps_2.4.0+dfsg-16_amd64.deb
Size	12301248
MD5sum	a9d8dccde463c948d658b343823d6967
SHA256	a05ce7936b5f93e77f39376bf2811c928e7d1dad8038589b1e05e3a95e23aa33

Files in package

• /usr/bin/alf
• /usr/bin/gustaf
• /usr/bin/insegt
• /usr/bin/mason_frag_sequencing
• /usr/bin/mason_genome
• /usr/bin/mason_materializer
• /usr/bin/mason_methylation
• /usr/bin/micro_razers
• /usr/bin/pair_align
• /usr/bin/rabema_build_gold_standard
• /usr/bin/rabema_evaluate
• /usr/bin/rabema_prepare_sam
• /usr/bin/razers
• /usr/bin/razers3
• /usr/bin/sak
• /usr/bin/seqan_tcoffee
• /usr/bin/snp_store
• /usr/bin/splazers
• /usr/bin/stellar
• /usr/bin/tree_recon
• /usr/bin/yara_indexer
• /usr/bin/yara_mapper
• /usr/lib/seqan/bin/alf
• /usr/lib/seqan/bin/bam2roi
• /usr/lib/seqan/bin/bed_sort.sh
• /usr/lib/seqan/bin/bisar
• /usr/lib/seqan/bin/casbar
• /usr/lib/seqan/bin/compute_gain
• /usr/lib/seqan/bin/dfi
• /usr/lib/seqan/bin/fiona
• /usr/lib/seqan/bin/fiona_illumina
• /usr/lib/seqan/bin/four2three
• /usr/lib/seqan/bin/fx_bam_coverage
• /usr/lib/seqan/bin/gff_sort.sh
• /usr/lib/seqan/bin/gustaf
• /usr/lib/seqan/bin/gustaf_mate_joining
• /usr/lib/seqan/bin/insegt
• /usr/lib/seqan/bin/mason_frag_sequencing
• /usr/lib/seqan/bin/mason_genome
• /usr/lib/seqan/bin/mason_materializer
• /usr/lib/seqan/bin/mason_methylation
• /usr/lib/seqan/bin/mason_simulator
• /usr/lib/seqan/bin/mason_splicing
• /usr/lib/seqan/bin/mason_variator
• /usr/lib/seqan/bin/micro_razers
• /usr/lib/seqan/bin/pair_align
• /usr/lib/seqan/bin/param_chooser
• /usr/lib/seqan/bin/plot.awk
• /usr/lib/seqan/bin/ps2pswLinks.gawk
• /usr/lib/seqan/bin/rabema_build_gold_standard
• /usr/lib/seqan/bin/rabema_evaluate
• /usr/lib/seqan/bin/rabema_prepare_sam
• /usr/lib/seqan/bin/razers
• /usr/lib/seqan/bin/razers3
• /usr/lib/seqan/bin/rep_sep
• /usr/lib/seqan/bin/roi_feature_projection
• /usr/lib/seqan/bin/roi_plot_9.sh
• /usr/lib/seqan/bin/roi_plot_thumbnails
• /usr/lib/seqan/bin/roi_sort.sh
• /usr/lib/seqan/bin/s4_join
• /usr/lib/seqan/bin/s4_search
• /usr/lib/seqan/bin/sak
• /usr/lib/seqan/bin/sam2matrix
• /usr/lib/seqan/bin/samcat
• /usr/lib/seqan/bin/seqan_tcoffee
• /usr/lib/seqan/bin/seqcons2
• /usr/lib/seqan/bin/sgip
• /usr/lib/seqan/bin/snp_store
• /usr/lib/seqan/bin/splazers
• /usr/lib/seqan/bin/stellar
• /usr/lib/seqan/bin/tree_recon
• /usr/lib/seqan/bin/yara_indexer
• /usr/lib/seqan/bin/yara_mapper
• /usr/share/doc/seqan-apps/README.Debian
• /usr/share/doc/seqan-apps/alf/README.gz
• /usr/share/doc/seqan-apps/alf/example/small.fasta
• /usr/share/doc/seqan-apps/bs_tools/README
• /usr/share/doc/seqan-apps/changelog.Debian.gz
• /usr/share/doc/seqan-apps/changelog.gz
• /usr/share/doc/seqan-apps/copyright
• /usr/share/doc/seqan-apps/dfi/README.gz
• /usr/share/doc/seqan-apps/dfi/example/fasta1.fa
• /usr/share/doc/seqan-apps/dfi/example/fasta2.fa
• /usr/share/doc/seqan-apps/fiona/README
• /usr/share/doc/seqan-apps/fiona/example/reads.fa.gz
• /usr/share/doc/seqan-apps/fx_tools/README
• /usr/share/doc/seqan-apps/gustaf/README.gz
• /usr/share/doc/seqan-apps/gustaf/example/adeno.fa.gz
• /usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa.gz
• /usr/share/doc/seqan-apps/gustaf/example/adeno_modified_reads.fa
• /usr/share/doc/seqan-apps/gustaf/example/stellar.gff
• /usr/share/doc/seqan-apps/insegt/README.gz
• /usr/share/doc/seqan-apps/insegt/example/annoOutput.gff
• /usr/share/doc/seqan-apps/insegt/example/annotations.gff
• /usr/share/doc/seqan-apps/insegt/example/readOutput.gff
• /usr/share/doc/seqan-apps/insegt/example/tupleOutput.gff
• /usr/share/doc/seqan-apps/mason2/README
• /usr/share/doc/seqan-apps/mason2/README.mason_frag_sequencing
• /usr/share/doc/seqan-apps/mason2/README.mason_genome
• /usr/share/doc/seqan-apps/mason2/README.mason_materializer
• /usr/share/doc/seqan-apps/mason2/README.mason_methylation.gz
• /usr/share/doc/seqan-apps/mason2/README.mason_simulator.gz
• /usr/share/doc/seqan-apps/mason2/README.mason_splicing
• /usr/share/doc/seqan-apps/mason2/README.mason_variator.gz
• /usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa.gz
• /usr/share/doc/seqan-apps/micro_razers/README.gz
• /usr/share/doc/seqan-apps/micro_razers/example/genome.fa
• /usr/share/doc/seqan-apps/micro_razers/example/reads.fa
• /usr/share/doc/seqan-apps/micro_razers/example/reads.fa.result
• /usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.tar.gz
• /usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.zip
• /usr/share/doc/seqan-apps/ngs_roi/README.gz
• /usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed.gz
• /usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf.gz
• /usr/share/doc/seqan-apps/ngs_roi/example/example.bam.gz
• /usr/share/doc/seqan-apps/pair_align/README
• /usr/share/doc/seqan-apps/param_chooser/README
• /usr/share/doc/seqan-apps/rabema/README.gz
• /usr/share/doc/seqan-apps/razers/README.gz
• /usr/share/doc/seqan-apps/razers/example/genome.fa
• /usr/share/doc/seqan-apps/razers/example/reads.fa
• /usr/share/doc/seqan-apps/razers/example/reads2.fa
• /usr/share/doc/seqan-apps/razers3/README.gz
• /usr/share/doc/seqan-apps/razers3/example/genome.fa
• /usr/share/doc/seqan-apps/razers3/example/reads.fa
• /usr/share/doc/seqan-apps/razers3/example/reads2.fa
• /usr/share/doc/seqan-apps/rep_sep/README
• /usr/share/doc/seqan-apps/sak/README
• /usr/share/doc/seqan-apps/sak/README.sak.txt
• /usr/share/doc/seqan-apps/sam2matrix/README
• /usr/share/doc/seqan-apps/samcat/README
• /usr/share/doc/seqan-apps/searchjoin/README
• /usr/share/doc/seqan-apps/seqan_tcoffee/README
• /usr/share/doc/seqan-apps/seqan_tcoffee/example/seq.fa
• /usr/share/doc/seqan-apps/seqcons2/README
• /usr/share/doc/seqan-apps/sgip/README
• /usr/share/doc/seqan-apps/sgip/example/iso_m2D_m196.A01
• /usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00.gz
• /usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01.gz
• /usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00.gz
• /usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01.gz
• /usr/share/doc/seqan-apps/sgip/example/latin-4
• /usr/share/doc/seqan-apps/sgip/example/lattice-4
• /usr/share/doc/seqan-apps/sgip/example/sts-7
• /usr/share/doc/seqan-apps/snp_store/README.gz
• /usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa.gz
• /usr/share/doc/seqan-apps/snp_store/example/exampleReads.gff
• /usr/share/doc/seqan-apps/splazers/README.gz
• /usr/share/doc/seqan-apps/splazers/example/genome.fa
• /usr/share/doc/seqan-apps/splazers/example/reads.fa
• /usr/share/doc/seqan-apps/splazers/example/reads.fa.result
• /usr/share/doc/seqan-apps/stellar/README.gz
• /usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta.gz
• /usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta.gz
• /usr/share/doc/seqan-apps/stellar/example/reads.fasta
• /usr/share/doc/seqan-apps/tree_recon/README
• /usr/share/doc/seqan-apps/tree_recon/example/example.dist
• /usr/share/doc/seqan-apps/yara/README.rst.gz
• /usr/share/man/man1/alf.1.gz
• /usr/share/man/man1/gustaf.1.gz
• /usr/share/man/man1/insegt.1.gz
• /usr/share/man/man1/mason_frag_sequencing.1.gz
• /usr/share/man/man1/mason_genome.1.gz
• /usr/share/man/man1/mason_materializer.1.gz
• /usr/share/man/man1/mason_methylation.1.gz
• /usr/share/man/man1/micro_razers.1.gz
• /usr/share/man/man1/pair_align.1.gz
• /usr/share/man/man1/rabema_build_gold_standard.1.gz
• /usr/share/man/man1/rabema_evaluate.1.gz
• /usr/share/man/man1/rabema_prepare_sam.1.gz
• /usr/share/man/man1/razers.1.gz
• /usr/share/man/man1/razers3.1.gz
• /usr/share/man/man1/sak.1.gz
• /usr/share/man/man1/seqan_tcoffee.1.gz
• /usr/share/man/man1/snp_store.1.gz
• /usr/share/man/man1/splazers.1.gz
• /usr/share/man/man1/stellar.1.gz
• /usr/share/man/man1/tree_recon.1.gz
• /usr/share/man/man1/yara_indexer.1.gz
• /usr/share/man/man1/yara_mapper.1.gz