Man page - remove_long_seqs(1)
Packages contas this manual
- fetch_refseq_bacterial_genomes_by_name(1)
- fetch_genome_by_accession(1)
- ncbi_search(1)
- fetch_all_refseq_chloroplast_genomes(1)
- build_blast_atlas(1)
- fetch_all_refseq_mitochondrial_genomes(1)
- build_blast_atlas_all_vs_all(1)
- remove_long_seqs(1)
- cgview_comparison_tool(1)
- remove_short_seqs(1)
- create_zoomed_maps(1)
- redraw_maps(1)
- fetch_all_refseq_bacterial_genomes(1)
- convert_vcf_to_features(1)
Package: cct
apt-get install cct
apt-get install cct
Manuals in package:
Documentations in package:
Manual
| REMOVE_LONG_SEQS(1) | User Commands | REMOVE_LONG_SEQS(1) |
NAME
remove_long_seqs - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
DESCRIPTION
USAGE:
- remove_long_seqs -i DIR -l INTEGER
DESCRIPTION:
- Removes GenBank files that are longer than the specified length from the provided directory.
REQUIRED ARGUMENTS:
-i, --input DIR
- Input directory of GenBank files with .gbk extensions.
-l, --length INTEGER
- Remove GenBank files that describe sequences longer than this length.
OPTIONAL ARGUMENTS:
-h, --help
- Show this message
EXAMPLE:
- remove_long_seqs -i my_project/comparison_genomes -l 100000
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
| August 2018 | remove_long_seqs 20170919 |