Man page - fastaq-expand_nucleotides(1)
Packages contains this manual
- fastaq-filter(1)
- fastaq-version(1)
- fastaq-fasta_to_fastq(1)
- fastaq-split_by_base_count(1)
- fastaq-to_fasta(1)
- fastaq-translate(1)
- fastaq-reverse_complement(1)
- fastaq-add_indels(1)
- fastaq-to_tiling_bam(1)
- fastaq-acgtn_only(1)
- fastaq-trim_ends(1)
- fastaq-to_orfs_gff(1)
- fastaq-get_ids(1)
- fastaq-to_perfect_reads(1)
- fastaq-trim_contigs(1)
- fastaq-scaffolds_to_contigs(1)
- fastaq-search_for_seq(1)
- fastaq-to_mira_xml(1)
- fastaq-to_random_subset(1)
- fastaq-to_fake_qual(1)
- fastaq-sort_by_size(1)
- fastaq-merge(1)
- fastaq-enumerate_names(1)
- fastaq-strip_illumina_suffix(1)
- fastaq-to_boulderio(1)
- fastaq-caf_to_fastq(1)
- fastaq-count_sequences(1)
- fastaq-interleave(1)
- fastaq-make_random_contigs(1)
- fastaq-to_unique_by_id(1)
- fastaq-deinterleave(1)
- fastaq-replace_bases(1)
- fastaq-capillary_to_pairs(1)
- fastaq-sequence_trim(1)
- fastaq-sort_by_name(1)
- fastaq-expand_nucleotides(1)
- fastaq-chunker(1)
- fastaq-get_seq_flanking_gaps(1)
- fastaq(1)
Package: fastaq
apt-get install fastaq
apt-get install fastaq
Manuals in package:
Documentations in package:
Manual
FASTAQ-EXPAND_NUCLEOTIDES
NAMEDESCRIPTION
positional arguments:
options:
NAME
fastaq_expand_nucleotides - Makes every combination of degenerate nucleotides
DESCRIPTION
usage: fastaq_expand_nucleotides <infile> <outfile>
Makes all combinations of sequences in input file by using all possibilities of redundant bases. e.g. ART could be AAT or AGT. Assumes input is nucleotides, not amino acids
positional arguments:
|
infile |
Name of input file |
outfile
Name of output file
options:
-h , --help
show this help message and exit