Man page - debruijn(1)

Packages contains this manual

Package:  ncbi-tools-bin
apt-get install ncbi-tools-bin

Manuals in package:
• asn2ff(1)
• asn2gb(1)
• asntool(1)
• vecscreen(1)
• sortbyquote(1)
• trna2tbl(1)
• asn2xml(1)
• getpub(1)
• gil2bin(1)
• gene2xml(1)
• asn2all(1)
• checksub(1)
• subfuse(1)
• getmesh(1)
• taxblast(1)
• asn2asn(1)
• spidey(1)
• tbl2asn(1)
• asnval(1)
• asnmacro(1)
• idfetch(1)
• asndhuff(1)
• insdseqget(1)
• nps2gps(1)
• indexpub(1)
• findspl(1)
• asn2fsa(1)
• gbseqget(1)
• errhdr(1)
• asn2idx(1)
• trna2sap(1)
• cleanasn(1)
• asndisc(1)
• makeset(1)
• fa2htgs(1)
• debruijn(1)
Documentations in package:
• ncbi-tools-bin

Manual

DEBRUIJN

NAME
SYNOPSIS
DESCRIPTION
OPTIONS
AUTHOR

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NAME

debruijn - de Bruijn sequence generator

SYNOPSIS

debruijn [ - ] -a str -n k

DESCRIPTION

debruijn generates (on standard output) a string over the specified alphabet containing every possible word (substring) of the specified length exactly once. Note: Substrings are not taken to wrap around, so the first k -1 characters repeat at the end.

OPTIONS

A summary of options is included below.

	-		Print usage message.
	-a str		Alphabet (supply ncbistdaa or ncbi2na for standard alphabets, or supply your own alphabet).
	-n k		Word size.

AUTHOR

The National Center for Biotechnology Information.

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