Man page - asn2xml(1)
Packages contains this manual
- asn2ff(1)
- asn2gb(1)
- asntool(1)
- vecscreen(1)
- sortbyquote(1)
- trna2tbl(1)
- asn2xml(1)
- getpub(1)
- gil2bin(1)
- gene2xml(1)
- asn2all(1)
- checksub(1)
- subfuse(1)
- getmesh(1)
- taxblast(1)
- asn2asn(1)
- spidey(1)
- tbl2asn(1)
- asnval(1)
- asnmacro(1)
- idfetch(1)
- asndhuff(1)
- insdseqget(1)
- nps2gps(1)
- indexpub(1)
- findspl(1)
- asn2fsa(1)
- gbseqget(1)
- errhdr(1)
- asn2idx(1)
- trna2sap(1)
- cleanasn(1)
- asndisc(1)
- makeset(1)
- fa2htgs(1)
- debruijn(1)
apt-get install ncbi-tools-bin
Manual
ASN2XML
NAMESYNOPSIS
DESCRIPTION
OPTIONS
AUTHOR
SEE ALSO
NAME
asn2xml - translate biological data from ASN.1 to XML
SYNOPSIS
asn2xml [ - ] [ -b F ] [ -e ] [ -i filename ] [ -l filename ] [ -o filename ] [ -s ]
DESCRIPTION
asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that it converts packed sequence data back into human-readable ASCII text.
OPTIONS
A summary of options is included below.
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- |
Print usage message |
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-b F |
Input asnfile in text mode |
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-e |
Input is a Seq-entry |
-i filename
Read ASN.1 from filename (default is stdin)
-l filename
Log errors to filename (default is stderr)
-o filename
Write XML to filename (default is stdout)
|
-s |
Input is a Seq-submit |
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO
asn2all (1), asn2asn (1), asn2ff (1), asn2fsa (1), asn2gb (1), asndhuff (1), gene2xml (1), /usr/share/doc/ncbi-tools-bin/README.asn2xml, /usr/share/doc/libncbi6t64/ncbixml.txt.gz