Package - last-align

Primary informations

Download package: http://deb.debian.org/debian/pool/main/l/last-align/last-align_1609-1+b1_amd64.deb (Size: 1.7MiB)

PropertyValue
Packagelast-align
Sourcelast-align (1609-1)
Version1609-1+b1
Installed-Size15312
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), python3
Recommendspython3-pil, parallel
Descriptiongenome-scale comparison of biological sequences
Description-md534c07e83cd3ffe3ca9aa9b81ea1ff067
Homepagehttps://gitlab.com/mcfrith/last
Built-Usingsimde (= 0.8.2-3)
Tagbiology::nucleic-acids, field::biology, field::biology:bioinformatics, implemented-in::c++, role::program
Sectionscience
Priorityoptional
Filenamepool/main/l/last-align/last-align_1609-1+b1_amd64.deb
Size1831832
MD5sumeeed9fb4839aa3eba3c171643ac12dc7
SHA256eae7dfe7fbd9186cbe88af211a53f13795e1672b6038f7053b2a5fcee9f76bd9

Files in package

  • /usr/bin/fasta-nr
  • /usr/bin/fastq-interleave
  • /usr/bin/last-dotplot
  • /usr/bin/last-map-probs
  • /usr/bin/last-merge-batches
  • /usr/bin/last-pair-probs
  • /usr/bin/last-postmask
  • /usr/bin/last-split
  • /usr/bin/last-train
  • /usr/bin/lastal
  • /usr/bin/lastdb
  • /usr/bin/maf-convert
  • /usr/bin/maf-cut
  • /usr/bin/maf-join
  • /usr/bin/maf-linked
  • /usr/bin/maf-sort
  • /usr/bin/maf-swap
  • /usr/bin/parallel-fasta
  • /usr/bin/parallel-fastq
  • /usr/lib/last-align/last-merge-batches-avx
  • /usr/lib/last-align/last-merge-batches-avx2
  • /usr/lib/last-align/last-merge-batches-plain
  • /usr/lib/last-align/last-merge-batches-sse2
  • /usr/lib/last-align/last-merge-batches-sse3
  • /usr/lib/last-align/last-merge-batches-sse4.1
  • /usr/lib/last-align/last-merge-batches-ssse3
  • /usr/lib/last-align/last-pair-probs-avx
  • /usr/lib/last-align/last-pair-probs-avx2
  • /usr/lib/last-align/last-pair-probs-plain
  • /usr/lib/last-align/last-pair-probs-sse2
  • /usr/lib/last-align/last-pair-probs-sse3
  • /usr/lib/last-align/last-pair-probs-sse4.1
  • /usr/lib/last-align/last-pair-probs-ssse3
  • /usr/lib/last-align/last-split-avx
  • /usr/lib/last-align/last-split-avx2
  • /usr/lib/last-align/last-split-plain
  • /usr/lib/last-align/last-split-sse2
  • /usr/lib/last-align/last-split-sse3
  • /usr/lib/last-align/last-split-sse4.1
  • /usr/lib/last-align/last-split-ssse3
  • /usr/lib/last-align/lastal-avx
  • /usr/lib/last-align/lastal-avx2
  • /usr/lib/last-align/lastal-plain
  • /usr/lib/last-align/lastal-sse2
  • /usr/lib/last-align/lastal-sse3
  • /usr/lib/last-align/lastal-sse4.1
  • /usr/lib/last-align/lastal-ssse3
  • /usr/lib/last-align/lastdb-avx
  • /usr/lib/last-align/lastdb-avx2
  • /usr/lib/last-align/lastdb-plain
  • /usr/lib/last-align/lastdb-sse2
  • /usr/lib/last-align/lastdb-sse3
  • /usr/lib/last-align/lastdb-sse4.1
  • /usr/lib/last-align/lastdb-ssse3
  • /usr/lib/last-align/simd-dispatch
  • /usr/share/doc-base/last-align.last-align-manual
  • /usr/share/doc-base/last-align.last-align-scripts
  • /usr/share/doc-base/last-align.last-align-seeds
  • /usr/share/doc/last-align/FAQ.rst
  • /usr/share/doc/last-align/README.test
  • /usr/share/doc/last-align/bisulfite.rst
  • /usr/share/doc/last-align/changelog.Debian.amd64.gz
  • /usr/share/doc/last-align/changelog.Debian.gz
  • /usr/share/doc/last-align/copyright
  • /usr/share/doc/last-align/examples/chickenMito.fa
  • /usr/share/doc/last-align/examples/fuguMito.fa
  • /usr/share/doc/last-align/examples/humanMito.fa
  • /usr/share/doc/last-align/examples/last-bisulfite-paired.sh
  • /usr/share/doc/last-align/examples/last-bisulfite.sh
  • /usr/share/doc/last-align/examples/mouseMito.fa
  • /usr/share/doc/last-align/examples/multiMito.maf
  • /usr/share/doc/last-align/examples/multiMito.sh
  • /usr/share/doc/last-align/examples/myalns.maf
  • /usr/share/doc/last-align/examples/titv212.mat
  • /usr/share/doc/last-align/examples/ublast.seed
  • /usr/share/doc/last-align/examples/vertebrateMito.gc
  • /usr/share/doc/last-align/last-cookbook.rst.gz
  • /usr/share/doc/last-align/last-dotplot.rst.gz
  • /usr/share/doc/last-align/last-evalues.rst.gz
  • /usr/share/doc/last-align/last-map-probs.rst
  • /usr/share/doc/last-align/last-matrices.rst.gz
  • /usr/share/doc/last-align/last-pair-probs.rst.gz
  • /usr/share/doc/last-align/last-papers.rst.gz
  • /usr/share/doc/last-align/last-parallel.rst
  • /usr/share/doc/last-align/last-postmask.rst
  • /usr/share/doc/last-align/last-scripts.txt
  • /usr/share/doc/last-align/last-seeds.rst.gz
  • /usr/share/doc/last-align/last-split.rst.gz
  • /usr/share/doc/last-align/last-train.rst.gz
  • /usr/share/doc/last-align/last-tuning.rst.gz
  • /usr/share/doc/last-align/lastal.rst.gz
  • /usr/share/doc/last-align/lastdb.rst.gz
  • /usr/share/doc/last-align/maf-convert.rst.gz
  • /usr/share/doc/last-align/maf-cut.rst
  • /usr/share/doc/last-align/maf-linked.rst
  • /usr/share/doc/last-align/run-unit-test
  • /usr/share/doc/last-align/tag-seeds.txt.gz
  • /usr/share/lintian/overrides/last-align
  • /usr/share/man/man1/fasta-nr.1.gz
  • /usr/share/man/man1/fastq-interleave.1.gz
  • /usr/share/man/man1/last-dotplot.1.gz
  • /usr/share/man/man1/last-map-probs.1.gz
  • /usr/share/man/man1/last-merge-batches.1.gz
  • /usr/share/man/man1/last-pair-probs.1.gz
  • /usr/share/man/man1/last-postmask.1.gz
  • /usr/share/man/man1/last-split.1.gz
  • /usr/share/man/man1/last-train.1.gz
  • /usr/share/man/man1/lastal.1.gz
  • /usr/share/man/man1/lastdb.1.gz
  • /usr/share/man/man1/maf-convert.1.gz
  • /usr/share/man/man1/maf-cut.1.gz
  • /usr/share/man/man1/maf-join.1.gz
  • /usr/share/man/man1/maf-sort.1.gz
  • /usr/share/man/man1/maf-swap.1.gz