Man page - vcf-concat(1)
Packages contas this manual
- vcf-subset(1)
- vcf-merge(1)
- vcf-compare(1)
- vcf-to-tab(1)
- vcf-sort(1)
- vcf-indel-stats(1)
- vcf-contrast(1)
- vcf-isec(1)
- vcf-validator(1)
- fill-ref-md5(1)
- vcf-convert(1)
- vcf-annotate(1)
- vcf-concat(1)
- fill-an-ac(1)
- vcf-fix-newlines(1)
- vcf-query(1)
- vcf-stats(1)
- vcf-consensus(1)
- vcf-tstv(1)
- fill-aa(1)
- vcf-phased-join(1)
- fill-fs(1)
- vcf-shuffle-cols(1)
- vcftools(1)
- vcf-fix-ploidy(1)
Package: vcftools
apt-get install vcftools
apt-get install vcftools
Manuals in package:
Documentations in package:
Manual
| VCF-CONCAT(1) | User Commands | VCF-CONCAT(1) |
NAME
vcf-concat - concatenate VCF files
SYNOPSIS
vcf-concat [OPTIONS] A.vcf.gz B.vcf.gz C.vcf.gz > out.vcf
DESCRIPTION
About: Convenience tool for concatenating VCF files. In the basic mode it does not
- do anything fancy except for a sanity check that all files have the same columns. When run with the -s option, it will perform a partial merge sort, looking at a limited number of open jobs simultaneously.
OPTIONS
- -f, --files <file>
- Read the list of files from a file.
- -s, --merge-sort <int>
- Allow small overlaps in N consecutive files.
- -h, -?, --help
- This help message.
| July 2011 | vcf-concat 0.1.5 |