Package - seer

Package:  seer
apt-get install seer
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/seer/seer_1.1.4-8+b1_amd64.deb (Size: 1.2MiB)

PropertyValue
Packageseer
Sourceseer (1.1.4-8)
Version1.1.4-8+b1
Installed-Size5064
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibarmadillo14 (>= 1:14.2.1+dfsg), libblas3 | libblas.so.3, libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgzstream0 (>= 1.5+dfsg), libhdf5-310 (>= 1.14.3), libstdc++6 (>= 14), zlib1g (>= 1:1.1.4), libtext-csv-perl
Suggestsfsm-lite
Descriptiongenomic sequence element (kmer) enrichment analysis
Description-md5979255ced90d884824e6cb3db05419ed
Homepagehttps://github.com/johnlees/seer
Sectionscience
Priorityoptional
Filenamepool/main/s/seer/seer_1.1.4-8+b1_amd64.deb
Size1227784
MD5sum12bf4a977e6ec05a2f0cd9e45509ba50
SHA25610c5dfe1fdc050497c41f37a9c85c928c7d38618178c9f7eb0cdd4c82202b6cf

Files in package

  • /usr/bin/R_mds
  • /usr/bin/blast_top_hits
  • /usr/bin/blastn_to_phandango
  • /usr/bin/combineKmers
  • /usr/bin/filter_seer
  • /usr/bin/hits_to_fastq
  • /usr/bin/kmds
  • /usr/bin/map_back
  • /usr/bin/mapping_to_phandango
  • /usr/bin/mash2matrix
  • /usr/bin/reformat_output
  • /usr/bin/seer
  • /usr/share/doc/seer/README.Debian
  • /usr/share/doc/seer/README.source
  • /usr/share/doc/seer/README.test
  • /usr/share/doc/seer/changelog.Debian.amd64.gz
  • /usr/share/doc/seer/changelog.Debian.gz
  • /usr/share/doc/seer/copyright
  • /usr/share/doc/seer/examples/6259_5_16.fa
  • /usr/share/doc/seer/examples/Makefile
  • /usr/share/doc/seer/examples/all_structure_new
  • /usr/share/doc/seer/examples/all_structure_new.samples
  • /usr/share/doc/seer/examples/assembly_locations.txt
  • /usr/share/doc/seer/examples/covariates.txt
  • /usr/share/doc/seer/examples/example.pheno
  • /usr/share/doc/seer/examples/example_kmers.gz
  • /usr/share/doc/seer/examples/example_wrapper.py
  • /usr/share/doc/seer/examples/filter_in.txt
  • /usr/share/doc/seer/examples/generate_test.pl
  • /usr/share/doc/seer/examples/map_in.txt
  • /usr/share/doc/seer/examples/run_test.pl
  • /usr/share/doc/seer/examples/subset.cont.pheno
  • /usr/share/doc/seer/examples/subset.pheno
  • /usr/share/doc/seer/examples/test1.e.txt
  • /usr/share/doc/seer/examples/test1.o.txt
  • /usr/share/doc/seer/examples/test2.e.txt
  • /usr/share/doc/seer/examples/test2.o.txt
  • /usr/share/doc/seer/examples/test3.e.txt
  • /usr/share/doc/seer/examples/test3.o.txt
  • /usr/share/doc/seer/examples/test4.e.txt
  • /usr/share/doc/seer/examples/test4.o.txt
  • /usr/share/doc/seer/examples/test5.e.txt
  • /usr/share/doc/seer/examples/test5.o.txt
  • /usr/share/doc/seer/examples/test6.e.txt
  • /usr/share/doc/seer/examples/test6.o.txt
  • /usr/share/doc/seer/examples/test7.e.txt
  • /usr/share/doc/seer/examples/test7.o.txt
  • /usr/share/doc/seer/examples/test8.e.txt
  • /usr/share/doc/seer/examples/test8.o.txt
  • /usr/share/doc/seer/examples/tests_passed
  • /usr/share/doc/seer/run-unit-test
  • /usr/share/man/man1/R_mds.1.gz
  • /usr/share/man/man1/blast_top_hits.1.gz
  • /usr/share/man/man1/blastn_to_phandango.1.gz
  • /usr/share/man/man1/combineKmers.1.gz
  • /usr/share/man/man1/filter_seer.1.gz
  • /usr/share/man/man1/hits_to_fastq.1.gz
  • /usr/share/man/man1/kmds.1.gz
  • /usr/share/man/man1/map_back.1.gz
  • /usr/share/man/man1/mapping_to_phandango.1.gz
  • /usr/share/man/man1/mash2matrix.1.gz
  • /usr/share/man/man1/reformat_output.1.gz
  • /usr/share/man/man1/seer.1.gz