Package - reapr

Package:  reapr
apt-get install reapr
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/reapr/reapr_1.0.18+dfsg-7_amd64.deb (Size: 209.9KiB)

PropertyValue
Packagereapr
Version1.0.18+dfsg-7
Installed-Size1073
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibbamtools2.5.2 (>= 2.5.2+dfsg), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), libtabixpp0t64 (>= 1.0.0), samtools, bamtools, smalt, r-base, snpomatic, tabix, libfile-copy-link-perl
Descriptionuniversal tool for genome assembly evaluation
Description-md5293360a33ad6e6e8a412e05853784134
Homepagehttps://www.sanger.ac.uk/science/tools/reapr
Tagbiology::nucleic-acids, field::biology, field::biology:bioinformatics, implemented-in::c++, interface::commandline, role::program, works-with::biological-sequence
Sectionscience
Priorityoptional
Filenamepool/main/r/reapr/reapr_1.0.18+dfsg-7_amd64.deb
Size214896
MD5sum1d7861c56a8315e7a814750fca4bcd44
SHA256640f977f7fed317fcc281e81355a430dc0f4bf687f5f8eb0f5f4aba343e7b7cc

Files in package

  • /usr/bin/reapr
  • /usr/lib/reapr/bam2fcdEstimate
  • /usr/lib/reapr/bam2fragCov
  • /usr/lib/reapr/bam2insert
  • /usr/lib/reapr/bam2perfect
  • /usr/lib/reapr/fa2gaps
  • /usr/lib/reapr/fa2gc
  • /usr/lib/reapr/make_plots
  • /usr/lib/reapr/n50
  • /usr/lib/reapr/reapr.pl
  • /usr/lib/reapr/scaff2contig
  • /usr/lib/reapr/task_break
  • /usr/lib/reapr/task_facheck.pl
  • /usr/lib/reapr/task_fcdrate
  • /usr/lib/reapr/task_gapresize
  • /usr/lib/reapr/task_perfectfrombam.pl
  • /usr/lib/reapr/task_perfectmap.pl
  • /usr/lib/reapr/task_pipeline.pl
  • /usr/lib/reapr/task_plots.pl
  • /usr/lib/reapr/task_preprocess.pl
  • /usr/lib/reapr/task_score
  • /usr/lib/reapr/task_seqrename.pl
  • /usr/lib/reapr/task_smaltmap.pl
  • /usr/lib/reapr/task_stats
  • /usr/lib/reapr/task_summary.pl
  • /usr/share/doc/reapr/changelog.Debian.gz
  • /usr/share/doc/reapr/changelog.gz
  • /usr/share/doc/reapr/copyright
  • /usr/share/man/man1/reapr-break.1.gz
  • /usr/share/man/man1/reapr-facheck.1.gz
  • /usr/share/man/man1/reapr-gapresize.1.gz
  • /usr/share/man/man1/reapr-perfectfrombam.1.gz
  • /usr/share/man/man1/reapr-perfectmap.1.gz
  • /usr/share/man/man1/reapr-pipeline.1.gz
  • /usr/share/man/man1/reapr-plots.1.gz
  • /usr/share/man/man1/reapr-preprocess.1.gz
  • /usr/share/man/man1/reapr-score.1.gz
  • /usr/share/man/man1/reapr-seqrename.1.gz
  • /usr/share/man/man1/reapr-smaltmap.1.gz
  • /usr/share/man/man1/reapr-stats.1.gz
  • /usr/share/man/man1/reapr-summary.1.gz
  • /usr/share/man/man1/reapr.1.gz