Man page - reapr-gapresize(1)
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Manual
| REAPR-GAPRESIZE(1) | REAPR-GAPRESIZE(1) |
NAME
reapr-gapresize - calculates gap sizes based on read mapping
SYNOPSIS
reapr gapresize [options] <assembly.fasta> <in.bam> <avg-fragment-length> <max-fragment-length> <outfileprefix>
OPTIONS
-g <int>
Only consider gaps of at least this length [1]
SEE ALSO
reapr(1)