Man page - glistmaker(1)

Packages contains this manual

Package:  genometester
apt-get install genometester

Manuals in package:
• glistcompare(1)
• gmer_caller(1)
• glistmaker(1)
• glistquery(1)
• gmer_counter(1)
Documentations in package:
• genometester

Manual

GLISTMAKER

NAME
SYNOPSIS
OPTIONS
EXAMPLES
SEE ALSO

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NAME

glistmaker - generate a list of all unique k-mers in input file with their frequencies

SYNOPSIS

glistmaker <INPUTFILES> [ OPTIONS ]

OPTIONS

	-v , --version - print version information and exit
	-h , --help - print this usage screen and exit
	-w , --wordlength NUMBER - specify index wordsize (1-32) (default 16)
	-c , --cutoff NUMBER - specify frequency cut-off (default 1)
	-o , --outputname STRING - specify output name (default "out")
	--num_threads - number of threads the program is run on (default MIN(8, num_input_files))
	--max_tables - maximum number of temporary tables (default MAX(num_threads, 2))
	--table_size - maximum size of the temporary table (default 500000000)
	-D - increase debug level

EXAMPLES

You could find some usage examples in /usr/share/doc/genometester/README.GenomeTester4.md

SEE ALSO

glistquery (1), glistcompare (1), gmer_caller (1), gmer_counter (1)

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