Man page - combinekmers(1)

Packages contains this manual

Package:  seer
apt-get install seer

Manuals in package:
• blastn_to_phandango(1)
• blast_top_hits(1)
• reformat_output(1)
• filter_seer(1)
• seer(1)
• kmds(1)
• mash2matrix(1)
• mapping_to_phandango(1)
• map_back(1)
• hits_to_fastq(1)
Documentations in package:
• seer

Manual

COMBINEKMERS

NAME
DESCRIPTION
OPTIONS
Required options:
Other options:
AUTHOR

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NAME

combineKmers - basic algorithm to combine kmer counts across samples

This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

DESCRIPTION

Basic algorithm to combine kmer counts across samples

OPTIONS

Required options:

-r [ --samples ] arg

file with tab separated sample name and kmer file

-o [ --output ] arg

output file prefix

Other options:

--min_samples arg (=1)

minimum number of samples kmer must occur in to be printed

-h [ --help ]

full help message

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

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