Package - psortb

Package:  psortb
apt-get install psortb
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/p/psortb/psortb_3.0.6+dfsg-4+b2_amd64.deb (Size: 15.6MiB)

PropertyValue
Packagepsortb
Sourcepsortb (3.0.6+dfsg-4)
Version3.0.6+dfsg-4+b2
Installed-Size116751
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.34), libgcc-s1 (>= 3.0), libmodhmm0 (>= 1.0+dfsg), libsquid1t64 (>= 1.9g+cvs20050121), libstdc++6 (>= 13.1), libsvmloc0 (>= 1.0+dfsg), perl (>= 5.40.0-8), perlapi-5.40.0, libbio-perl-perl, libbio-perl-run-perl, libalgorithm-svm-perl, pftools, librpc-xml-perl
Descriptionbacterial localization prediction tool
Description-md5c4c3c9336dc64d2e6c762b3285d6c6be
Homepagehttps://www.psort.org/
Sectionscience
Priorityoptional
Filenamepool/main/p/psortb/psortb_3.0.6+dfsg-4+b2_amd64.deb
Size16369036
MD5sum05fbaf75c8c3bcca39155ea05ccad2fd
SHA256514a92fed70806b7bc400c04157aee4108c74e9c3f8d30fd2f5d47c42e0e228b

Files in package

  • /usr/bin/psort
  • /usr/lib/psort/conf/analysis/modhmm/S_TMHMM_0.92b.hmg
  • /usr/lib/psort/conf/analysis/modhmm/amino_multi.pri
  • /usr/lib/psort/conf/analysis/modhmm/replacement_letter_multi.rpl
  • /usr/lib/psort/conf/analysis/motif/archaea/changes
  • /usr/lib/psort/conf/analysis/motif/archaea/motifs.txt
  • /usr/lib/psort/conf/analysis/motif/archaea/notes.txt
  • /usr/lib/psort/conf/analysis/motif/gramneg/motifs.txt
  • /usr/lib/psort/conf/analysis/motif/grampos/motifs.txt
  • /usr/lib/psort/conf/analysis/omp-motif/omp-motifs.txt
  • /usr/lib/psort/conf/analysis/profile/archaea/notes.txt
  • /usr/lib/psort/conf/analysis/profile/archaea/profile_ids
  • /usr/lib/psort/conf/analysis/profile/archaea/ps_ALL
  • /usr/lib/psort/conf/analysis/profile/gramneg/profile_ids
  • /usr/lib/psort/conf/analysis/profile/gramneg/ps_ALL
  • /usr/lib/psort/conf/analysis/profile/grampos/profile_ids
  • /usr/lib/psort/conf/analysis/profile/grampos/ps_ALL
  • /usr/lib/psort/conf/analysis/sclblast/archaea/notes
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast+swissprot+some_manual
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast.pos
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast.pot
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast.ptf
  • /usr/lib/psort/conf/analysis/sclblast/archaea/sclblast.pto
  • /usr/lib/psort/conf/analysis/sclblast/gramneg/sclblast
  • /usr/lib/psort/conf/analysis/sclblast/gramneg/sclblast.pos
  • /usr/lib/psort/conf/analysis/sclblast/gramneg/sclblast.pot
  • /usr/lib/psort/conf/analysis/sclblast/gramneg/sclblast.ptf
  • /usr/lib/psort/conf/analysis/sclblast/gramneg/sclblast.pto
  • /usr/lib/psort/conf/analysis/sclblast/grampos/sclblast
  • /usr/lib/psort/conf/analysis/sclblast/grampos/sclblast.pos
  • /usr/lib/psort/conf/analysis/sclblast/grampos/sclblast.pot
  • /usr/lib/psort/conf/analysis/sclblast/grampos/sclblast.ptf
  • /usr/lib/psort/conf/analysis/sclblast/grampos/sclblast.pto
  • /usr/lib/psort/conf/analysis/sclblast/makedb.sh
  • /usr/lib/psort/conf/analysis/signal/archaea/check-sig
  • /usr/lib/psort/conf/analysis/signal/archaea/model.hmm
  • /usr/lib/psort/conf/analysis/signal/archaea/model.svm
  • /usr/lib/psort/conf/analysis/signal/archaea/notes
  • /usr/lib/psort/conf/analysis/signal/gramneg/check-sig
  • /usr/lib/psort/conf/analysis/signal/gramneg/model.hmm
  • /usr/lib/psort/conf/analysis/signal/gramneg/model.svm
  • /usr/lib/psort/conf/analysis/signal/grampos/check-sig
  • /usr/lib/psort/conf/analysis/signal/grampos/model.hmm
  • /usr/lib/psort/conf/analysis/signal/grampos/model.svm
  • /usr/lib/psort/conf/analysis/subloc/archaea/Cellwall/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Cellwall/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Cytoplasmic/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Cytoplasmic/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Extracellular/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Extracellular/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Membrane/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/Membrane/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/archaea/notes.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Cytoplasmic/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Cytoplasmic/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Extracellular/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Extracellular/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Innermembrane/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Innermembrane/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Outermembrane/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Outermembrane/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Periplasmic/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/gramneg/Periplasmic/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Cellwall/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Cellwall/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Cytoplasmic/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Cytoplasmic/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Extracellular/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Extracellular/fre_patterns.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Membrane/SVM_MODEL.txt
  • /usr/lib/psort/conf/analysis/subloc/grampos/Membrane/fre_patterns.txt
  • /usr/lib/psort/conf/output/bayesian/archaea/bayes.model
  • /usr/lib/psort/conf/output/bayesian/gramneg/bayes-rpc.model
  • /usr/lib/psort/conf/output/bayesian/gramneg/bayes.model
  • /usr/lib/psort/conf/output/bayesian/grampos/bayes-rpc.model
  • /usr/lib/psort/conf/output/bayesian/grampos/bayes.model
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Algorithm/HMM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Algorithm/HMM/Hit.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Algorithm/HMM/Hit/Domain.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Algorithm/HMM/Hit/Global.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Algorithm/HMM/Report.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Motif/Match.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Motif/Pattern.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Constants.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Install.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/ModHMM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/AnalysisI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Bayesian.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/HMMTOP.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/InputI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/ModHMM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Null.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/OMPMotif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/OutputI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Profile.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Rules.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/SCLBlast.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/SVMLoc.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/SVMLocApache.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Module/Signal.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/ModuleI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Pathway.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Profile.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Profile/Match.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Formatter.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Formatter/html.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Formatter/long.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Formatter/normal.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Formatter/terse.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/Report/Result.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/SVMLoc.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/SVMLoc/DataSet.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/PSort/XMLRPC/Client.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/HMMTOP.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/HMMTOP/Helix.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/HMMTOP/Report.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/SCLBlast.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/SCLBlast/Hit.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/SCLBlast/Report.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Run/SCLBlastLocal.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/SVMLoc.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Signal.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/Bio/Tools/Signal/Report.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Algorithm/HMM/HMM.so
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Algorithm/HMM/autosplit.ix
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Bio/Tools/PSort/ModHMM/ModHMM.so
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Bio/Tools/PSort/ModHMM/autosplit.ix
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Bio/Tools/PSort/SVMLoc/SVMLoc.so
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/Bio/Tools/PSort/SVMLoc/autosplit.ix
  • /usr/share/doc/psortb/changelog.Debian.amd64.gz
  • /usr/share/doc/psortb/changelog.Debian.gz
  • /usr/share/doc/psortb/changelog.gz
  • /usr/share/doc/psortb/copyright
  • /usr/share/lintian/overrides/psortb
  • /usr/share/man/man1/psort.1.gz
  • /usr/share/man/man3/Algorithm::HMM.3pm.gz
  • /usr/share/man/man3/Algorithm::HMM::Hit.3pm.gz
  • /usr/share/man/man3/Algorithm::HMM::Hit::Domain.3pm.gz
  • /usr/share/man/man3/Algorithm::HMM::Hit::Global.3pm.gz
  • /usr/share/man/man3/Algorithm::HMM::Report.3pm.gz
  • /usr/share/man/man3/Bio::Tools::Motif.3pm.gz
  • /usr/share/man/man3/Bio::Tools::Motif::Match.3pm.gz
  • /usr/share/man/man3/Bio::Tools::Motif::Pattern.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::ModHMM.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::AnalysisI.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::InputI.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::Motif.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::Null.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::OMPMotif.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::OutputI.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Module::Profile.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::ModuleI.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Pathway.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Profile.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::Profile::Match.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::SVMLoc.3pm.gz
  • /usr/share/man/man3/Bio::Tools::PSort::SVMLoc::DataSet.3pm.gz
  • /usr/share/man/man3/Bio::Tools::Run::HMMTOP.3pm.gz
  • /usr/share/man/man3/Bio::Tools::SVMLoc.3pm.gz
  • /usr/share/man/man3/Bio::Tools::Signal.3pm.gz