Package - kraken

Package:  kraken
apt-get install kraken
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/k/kraken/kraken_1.1.1-4_amd64.deb (Size: 734.8KiB)

PropertyValue
Packagekraken
Version1.1.1-4
Installed-Size1531
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 5.2), jellyfish1
Descriptionassigning taxonomic labels to short DNA sequences
Description-md54dc49da345dc88dcd656d9a30393ce7e
Homepagehttp://ccb.jhu.edu/software/kraken/
Sectionscience
Priorityoptional
Filenamepool/main/k/kraken/kraken_1.1.1-4_amd64.deb
Size752404
MD5sum588e5a136a170e67096886388e817ba1
SHA25674bfa7352b060f6b048845f1b5f52b209a0b188cba07febd8fe66ed0ece7ee73

Files in package

  • /usr/bin/kraken
  • /usr/bin/kraken-build
  • /usr/bin/kraken-filter
  • /usr/bin/kraken-mpa-report
  • /usr/bin/kraken-report
  • /usr/bin/kraken-translate
  • /usr/lib/kraken/add_to_library.sh
  • /usr/lib/kraken/build_kraken_db.sh
  • /usr/lib/kraken/check_for_jellyfish.sh
  • /usr/lib/kraken/classify
  • /usr/lib/kraken/clean_db.sh
  • /usr/lib/kraken/convert_gb_to_fa.pl
  • /usr/lib/kraken/cp_into_tempfile.pl
  • /usr/lib/kraken/db_shrink
  • /usr/lib/kraken/db_sort
  • /usr/lib/kraken/download_genomic_library.sh
  • /usr/lib/kraken/download_taxonomy.sh
  • /usr/lib/kraken/kmer_estimator
  • /usr/lib/kraken/kraken
  • /usr/lib/kraken/kraken-build
  • /usr/lib/kraken/kraken-filter
  • /usr/lib/kraken/kraken-mpa-report
  • /usr/lib/kraken/kraken-report
  • /usr/lib/kraken/kraken-translate
  • /usr/lib/kraken/krakenlib.pm
  • /usr/lib/kraken/lookup_accession_numbers.pl
  • /usr/lib/kraken/make_seqid_to_taxid_map
  • /usr/lib/kraken/read_merger.pl
  • /usr/lib/kraken/report_gi_numbers.pl
  • /usr/lib/kraken/rsync_from_ncbi.pl
  • /usr/lib/kraken/scan_fasta_file.pl
  • /usr/lib/kraken/set_lcas
  • /usr/lib/kraken/shrink_db.sh
  • /usr/lib/kraken/standard_installation.sh
  • /usr/lib/kraken/upgrade_db.sh
  • /usr/lib/kraken/verify_gi_numbers.pl
  • /usr/share/doc-base/kraken.kraken
  • /usr/share/doc/kraken/README.test
  • /usr/share/doc/kraken/changelog.Debian.gz
  • /usr/share/doc/kraken/changelog.gz
  • /usr/share/doc/kraken/copyright
  • /usr/share/doc/kraken/html/MANUAL.html
  • /usr/share/doc/kraken/html/bar-bg.png
  • /usr/share/doc/kraken/html/head.html
  • /usr/share/doc/kraken/html/index.html
  • /usr/share/doc/kraken/html/kraken.css
  • /usr/share/doc/kraken/html/top.html
  • /usr/share/doc/kraken/run-unit-test
  • /usr/share/doc/kraken/test_data/Acartia_tonsa.fasta
  • /usr/share/doc/kraken/test_data/Acinetobacter_phage.fasta.gz
  • /usr/share/doc/kraken/test_data/test.fa
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/citation.dmp
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/delnodes.dmp.gz
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/division.dmp
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/gc.prt.gz
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/gencode.dmp.gz
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/gi_taxid_nucl.dmp
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/merged.dmp.gz
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/names.dmp
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/nodes.dmp
  • /usr/share/doc/kraken/test_data/test_db/taxonomy/readme.txt
  • /usr/share/man/man1/kraken-build.1.gz
  • /usr/share/man/man1/kraken-filter.1.gz
  • /usr/share/man/man1/kraken-mpa-report.1.gz
  • /usr/share/man/man1/kraken-report.1.gz
  • /usr/share/man/man1/kraken-translate.1.gz
  • /usr/share/man/man1/kraken.1.gz