Man page - kraken-mpa-report(1)

Packages contains this manual

Package:  kraken
apt-get install kraken

Manuals in package:
• kraken-report(1)
• kraken-filter(1)
• kraken(1)
• kraken-translate(1)
• kraken-mpa-report(1)
• kraken-build(1)
Documentations in package:
• kraken

Manual

KRAKEN-MPA-REPORT

NAME
SYNOPSIS
OPTIONS

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NAME

kraken-mpa-report - assigning taxonomic labels to short DNA sequences

SYNOPSIS

kraken-mpa-report [ --db KRAKEN_DB_NAME ] [ options ] <kraken output file(s)>

OPTIONS

--db NAME

Name of Kraken database (default: none)

--show-zeros

Display taxa even if they lack a read in any sample

--header-line

Display a header line indicating sample IDs (sample IDs are the filenames)

--intermediate-ranks

Display taxa not at the standard ranks with x__ prefix

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