Package - biobambam2

Primary informations

Download package: http://deb.debian.org/debian/pool/main/b/biobambam2/biobambam2_2.0.185+ds-2_amd64.deb (Size: 9.0MiB)

Property	Value
Package	biobambam2
Version	2.0.185+ds-2
Installed-Size	64327
Maintainer	Debian Med Packaging Team
Architecture	amd64
Depends	libc6 (>= 2.34), libgcc-s1 (>= 3.4), libgomp1 (>= 6), libmaus2-2 (>= 2.0.813+ds), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4)
Description	tools for early stage alignment file processing
Description-md5	988ecf132d35e18278833435cc2ed73f
Homepage	https://gitlab.com/german.tischler/biobambam2
Section	science
Priority	optional
Filename	pool/main/b/biobambam2/biobambam2_2.0.185+ds-2_amd64.deb
Size	9424696
MD5sum	db8b593d7ae17acdacdd6c4d604e967e
SHA256	b012a01df8a2e3bbfa38a51d0d61314227c5779869e449d543f7b53ac8e143c4

Files in package

• /usr/bin/bam12auxmerge
• /usr/bin/bam12split
• /usr/bin/bam12strip
• /usr/bin/bamadapterclip
• /usr/bin/bamadapterfind
• /usr/bin/bamalignfrac
• /usr/bin/bamauxmerge
• /usr/bin/bamauxmerge2
• /usr/bin/bamauxsort
• /usr/bin/bamcat
• /usr/bin/bamchecksort
• /usr/bin/bamclipXT
• /usr/bin/bamclipreinsert
• /usr/bin/bamcollate2
• /usr/bin/bamdepth
• /usr/bin/bamdepthintersect
• /usr/bin/bamdifference
• /usr/bin/bamdownsamplerandom
• /usr/bin/bamexplode
• /usr/bin/bamexploderef
• /usr/bin/bamfastcat
• /usr/bin/bamfastexploderef
• /usr/bin/bamfastnumextract
• /usr/bin/bamfastsplit
• /usr/bin/bamfeaturecount
• /usr/bin/bamfillquery
• /usr/bin/bamfilteraux
• /usr/bin/bamfiltereofblocks
• /usr/bin/bamfilterflags
• /usr/bin/bamfilterheader
• /usr/bin/bamfilterheader2
• /usr/bin/bamfilterk
• /usr/bin/bamfilterlength
• /usr/bin/bamfiltermc
• /usr/bin/bamfilternames
• /usr/bin/bamfilterrefid
• /usr/bin/bamfilterrg
• /usr/bin/bamfixmateinformation
• /usr/bin/bamfixpairinfo
• /usr/bin/bamflagsplit
• /usr/bin/bamindex
• /usr/bin/bamintervalcomment
• /usr/bin/bamintervalcommenthist
• /usr/bin/bammapdist
• /usr/bin/bammarkduplicates
• /usr/bin/bammarkduplicates2
• /usr/bin/bammarkduplicatesopt
• /usr/bin/bammaskflags
• /usr/bin/bammdnm
• /usr/bin/bammerge
• /usr/bin/bamnumericalindex
• /usr/bin/bamnumericalindexstats
• /usr/bin/bamrank
• /usr/bin/bamranksort
• /usr/bin/bamrecalculatecigar
• /usr/bin/bamrecompress
• /usr/bin/bamrefextract
• /usr/bin/bamrefinterval
• /usr/bin/bamreheader
• /usr/bin/bamreplacechecksums
• /usr/bin/bamreset
• /usr/bin/bamscrapcount
• /usr/bin/bamseqchksum
• /usr/bin/bamsormadup
• /usr/bin/bamsort
• /usr/bin/bamsplit
• /usr/bin/bamsplitdiv
• /usr/bin/bamstreamingmarkduplicates
• /usr/bin/bamtofastq
• /usr/bin/bamvalidate
• /usr/bin/bamzztoname
• /usr/bin/fastaexplod
• /usr/bin/fastqtobam
• /usr/bin/fastqtobam2
• /usr/bin/normalisefasta
• /usr/bin/populaterefcache
• /usr/share/doc/biobambam2/README.gz
• /usr/share/doc/biobambam2/README.md.gz
• /usr/share/doc/biobambam2/README.test
• /usr/share/doc/biobambam2/README.test-data
• /usr/share/doc/biobambam2/changelog.Debian.gz
• /usr/share/doc/biobambam2/changelog.gz
• /usr/share/doc/biobambam2/copyright
• /usr/share/doc/biobambam2/examples/README.test-data
• /usr/share/doc/biobambam2/examples/SRR11728627.bam
• /usr/share/doc/biobambam2/examples/SRR11728641.bam
• /usr/share/doc/biobambam2/run-unit-test
• /usr/share/man/man1/bam12auxmerge.1.gz
• /usr/share/man/man1/bam12split.1.gz
• /usr/share/man/man1/bam12strip.1.gz
• /usr/share/man/man1/bamadapterclip.1.gz
• /usr/share/man/man1/bamadapterfind.1.gz
• /usr/share/man/man1/bamalignfrac.1.gz
• /usr/share/man/man1/bamauxmerge.1.gz
• /usr/share/man/man1/bamauxmerge2.1.gz
• /usr/share/man/man1/bamauxsort.1.gz
• /usr/share/man/man1/bambisect.1.gz
• /usr/share/man/man1/bamcat.1.gz
• /usr/share/man/man1/bamchecksort.1.gz
• /usr/share/man/man1/bamclipXT.1.gz
• /usr/share/man/man1/bamclipreinsert.1.gz
• /usr/share/man/man1/bamcollate2.1.gz
• /usr/share/man/man1/bamconsensus.1.gz
• /usr/share/man/man1/bamdownsamplerandom.1.gz
• /usr/share/man/man1/bamfeaturecount.1.gz
• /usr/share/man/man1/bamfillquery.1.gz
• /usr/share/man/man1/bamfilteraux.1.gz
• /usr/share/man/man1/bamfilterflags.1.gz
• /usr/share/man/man1/bamfilterheader.1.gz
• /usr/share/man/man1/bamfilterheader2.1.gz
• /usr/share/man/man1/bamfiltermc.1.gz
• /usr/share/man/man1/bamfilterrg.1.gz
• /usr/share/man/man1/bamfixmateinformation.1.gz
• /usr/share/man/man1/bamflagsplit.1.gz
• /usr/share/man/man1/bamindex.1.gz
• /usr/share/man/man1/bamintervalcomment.1.gz
• /usr/share/man/man1/bammarkduplicates.1.gz
• /usr/share/man/man1/bammarkduplicates2.1.gz
• /usr/share/man/man1/bammarkduplicatesopt.1.gz
• /usr/share/man/man1/bammaskflags.1.gz
• /usr/share/man/man1/bammdnm.1.gz
• /usr/share/man/man1/bammerge.1.gz
• /usr/share/man/man1/bamrank.1.gz
• /usr/share/man/man1/bamranksort.1.gz
• /usr/share/man/man1/bamrecalculatecigar.1.gz
• /usr/share/man/man1/bamrecompress.1.gz
• /usr/share/man/man1/bamreset.1.gz
• /usr/share/man/man1/bamseqchksum.1.gz
• /usr/share/man/man1/bamsormadup.1.gz
• /usr/share/man/man1/bamsort.1.gz
• /usr/share/man/man1/bamsplit.1.gz
• /usr/share/man/man1/bamsplitdiv.1.gz
• /usr/share/man/man1/bamstreamingmarkduplicates.1.gz
• /usr/share/man/man1/bamtagconversion.1.gz
• /usr/share/man/man1/bamtofastq.1.gz
• /usr/share/man/man1/bamvalidate.1.gz
• /usr/share/man/man1/bamzztoname.1.gz
• /usr/share/man/man1/fastaexplod.1.gz
• /usr/share/man/man1/fastqtobam.1.gz
• /usr/share/man/man1/filtergtf.1.gz
• /usr/share/man/man1/normalisefasta.1.gz