Man page - bp_meta_gff(1)

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Package: libbio-db-gff-perl
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libbio-db-gff-perl

Manual

BP_META_GFF

NAME
SYNOPSIS
DESCRIPTION
COMMAND-LINE OPTIONS
SEE ALSO
AUTHOR

NAME

bp_meta_gff.pl - Get/set Bio::DB::GFF meta-data

SYNOPSIS

# set the following meta data values
% bp_meta_gff.pl -d testdb tag1=value1 tag2=value2
# get the indicated meta data value
% bp_meta_gff.pl -d testdb tag1 tag2

DESCRIPTION

This script gets or sets metadata in a Bio::DB::GFF database. Not all adaptors support this operation! To set a series of tags, pass a set of tag=value pairs to the script. To get the contents of a series of tags, pass the bare tag names.

The output from the get operation will be an easily parseable set of tag=value pairs, one per line.

COMMAND-LINE OPTIONS

Command-line options can be abbreviated to single-letter options. e.g. -d instead of --database.

--database <dsn> Mysql database name (default dbi:mysql:test)
--adaptor <adaptor> Mysql adaptor (default dbi::mysqlopt)
--user <user> Username for mysql authentication
--pass <password> Password for mysql authentication

AUTHOR

Lincoln Stein, lstein@cshl.org

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER .txt for disclaimers of warranty.