Package - staden-io-lib-examples

Package:  staden-io-lib-examples
apt-get install staden-io-lib-examples
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/staden-io-lib/staden-io-lib-examples_1.15.0-1.1_all.deb (Size: 2.6MiB)

PropertyValue
Packagestaden-io-lib-examples
Sourcestaden-io-lib
Version1.15.0-1.1
Installed-Size2825
MaintainerDebian Med Packaging Team
Architectureall
Recommendsstaden-io-lib-utils
Descriptionprograms for manipulating DNA sequencing files (usage examples)
Description-md50b2d1b17fa895cbb6f711efc37878b8f
Multi-Archforeign
Homepagehttps://github.com/jkbonfield/io_lib
Sectionscience
Priorityoptional
Filenamepool/main/s/staden-io-lib/staden-io-lib-examples_1.15.0-1.1_all.deb
Size2754072
MD5sumc9d97d991aa738b9cb5a7311e5c8ad4d
SHA256661d7d7e96ed1203227e8c8a49db35767d9351b8a96dd52d4698e6143191f270

Files in package

  • /usr/share/doc/staden-io-lib-examples/changelog.Debian.gz
  • /usr/share/doc/staden-io-lib-examples/changelog.gz
  • /usr/share/doc/staden-io-lib-examples/copyright
  • /usr/share/doc/staden-io-lib/test/compare_sam.pl
  • /usr/share/doc/staden-io-lib/test/cram_io.test
  • /usr/share/doc/staden-io-lib/test/data/9827_rand3.cram.gz
  • /usr/share/doc/staden-io-lib/test/data/9827_rand3.sam.gz
  • /usr/share/doc/staden-io-lib/test/data/both.info
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_BUSTARD_PARAMS.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_CHASTITY.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_FIRECREST_PARAMS.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_MATRIX_FWD.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_PHASING_FWD.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/4_PROGRAM_ID.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_int.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_nse.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_prb.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_seq.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_sig2.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_int.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_nse.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_prb.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_seq.txt
  • /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_sig2.txt.gz
  • /usr/share/doc/staden-io-lib/test/data/both.srf.gz
  • /usr/share/doc/staden-io-lib/test/data/c1#bounds.sam
  • /usr/share/doc/staden-io-lib/test/data/c1#clip.sam
  • /usr/share/doc/staden-io-lib/test/data/c1#pad1.sam
  • /usr/share/doc/staden-io-lib/test/data/c1#pad2.sam
  • /usr/share/doc/staden-io-lib/test/data/c1#pad3.sam
  • /usr/share/doc/staden-io-lib/test/data/c1.fa
  • /usr/share/doc/staden-io-lib/test/data/c1.fa.fai
  • /usr/share/doc/staden-io-lib/test/data/ce#1.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#2.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#5.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#5b.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#5b_java.cram.gz
  • /usr/share/doc/staden-io-lib/test/data/ce#5b_java.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#large_seq.sam.gz
  • /usr/share/doc/staden-io-lib/test/data/ce#tag_depadded.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#tag_padded.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#unmap.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#unmap1.sam
  • /usr/share/doc/staden-io-lib/test/data/ce#unmap2.sam.gz
  • /usr/share/doc/staden-io-lib/test/data/ce.fa.fai
  • /usr/share/doc/staden-io-lib/test/data/ce.fa.gz
  • /usr/share/doc/staden-io-lib/test/data/longref.sam
  • /usr/share/doc/staden-io-lib/test/data/proc.info
  • /usr/share/doc/staden-io-lib/test/data/proc.srf.gz
  • /usr/share/doc/staden-io-lib/test/data/proc.srf.indexed.gz
  • /usr/share/doc/staden-io-lib/test/data/raw.info
  • /usr/share/doc/staden-io-lib/test/data/raw.srf.gz
  • /usr/share/doc/staden-io-lib/test/data/slx-C.fasta
  • /usr/share/doc/staden-io-lib/test/data/slx-C.fastq
  • /usr/share/doc/staden-io-lib/test/data/slx.fasta
  • /usr/share/doc/staden-io-lib/test/data/slx.fastq
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#aux.sam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#aux_java.cram
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#aux_java.sam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#special.sam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#values1.bam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#values2.bam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux#values4.bam
  • /usr/share/doc/staden-io-lib/test/data/tag_aux.fa
  • /usr/share/doc/staden-io-lib/test/data/tag_aux.fa.fai
  • /usr/share/doc/staden-io-lib/test/data/test_run_4_134_369_182.srf.gz
  • /usr/share/doc/staden-io-lib/test/data/traces.srf
  • /usr/share/doc/staden-io-lib/test/data/xx#MD.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#MD2.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#blank.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#large_aux.sam.gz
  • /usr/share/doc/staden-io-lib/test/data/xx#large_aux2.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#large_aux_java.cram.gz
  • /usr/share/doc/staden-io-lib/test/data/xx#large_aux_java.sam.gz
  • /usr/share/doc/staden-io-lib/test/data/xx#minimal.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#pair.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#repeated.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#rg.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#triplet.sam
  • /usr/share/doc/staden-io-lib/test/data/xx#unsorted.sam
  • /usr/share/doc/staden-io-lib/test/data/xx.fa
  • /usr/share/doc/staden-io-lib/test/data/xx.fa.fai
  • /usr/share/doc/staden-io-lib/test/generate_data.pl
  • /usr/share/doc/staden-io-lib/test/java.test
  • /usr/share/doc/staden-io-lib/test/scram.test.gz
  • /usr/share/doc/staden-io-lib/test/scram_mt30.test
  • /usr/share/doc/staden-io-lib/test/scram_mt31.test
  • /usr/share/doc/staden-io-lib/test/scram_mt40.test
  • /usr/share/doc/staden-io-lib/test/srf2fasta.test
  • /usr/share/doc/staden-io-lib/test/srf2fastq.test
  • /usr/share/doc/staden-io-lib/test/srf_filter.test
  • /usr/share/doc/staden-io-lib/test/srf_index.test
  • /usr/share/doc/staden-io-lib/test/srf_info.test
  • /usr/share/lintian/overrides/staden-io-lib-examples