Package - staden-io-lib-examples
Primary informations
Download package: http://deb.debian.org/debian/pool/main/s/staden-io-lib/staden-io-lib-examples_1.15.0-1.1_all.deb (Size: 2.6MiB)| Property | Value |
|---|---|
| Package | staden-io-lib-examples |
| Source | staden-io-lib |
| Version | 1.15.0-1.1 |
| Installed-Size | 2825 |
| Maintainer | Debian Med Packaging Team |
| Architecture | all |
| Recommends | staden-io-lib-utils |
| Description | programs for manipulating DNA sequencing files (usage examples) |
| Description-md5 | 0b2d1b17fa895cbb6f711efc37878b8f |
| Multi-Arch | foreign |
| Homepage | https://github.com/jkbonfield/io_lib |
| Section | science |
| Priority | optional |
| Filename | pool/main/s/staden-io-lib/staden-io-lib-examples_1.15.0-1.1_all.deb |
| Size | 2754072 |
| MD5sum | c9d97d991aa738b9cb5a7311e5c8ad4d |
| SHA256 | 661d7d7e96ed1203227e8c8a49db35767d9351b8a96dd52d4698e6143191f270 |
Files in package
- /usr/share/doc/staden-io-lib-examples/changelog.Debian.gz
- /usr/share/doc/staden-io-lib-examples/changelog.gz
- /usr/share/doc/staden-io-lib-examples/copyright
- /usr/share/doc/staden-io-lib/test/compare_sam.pl
- /usr/share/doc/staden-io-lib/test/cram_io.test
- /usr/share/doc/staden-io-lib/test/data/9827_rand3.cram.gz
- /usr/share/doc/staden-io-lib/test/data/9827_rand3.sam.gz
- /usr/share/doc/staden-io-lib/test/data/both.info
- /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_BUSTARD_PARAMS.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_CHASTITY.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_FIRECREST_PARAMS.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_MATRIX_FWD.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_PHASING_FWD.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/4_PROGRAM_ID.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_int.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_nse.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_prb.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_seq.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_sig2.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_int.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_nse.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_prb.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_seq.txt
- /usr/share/doc/staden-io-lib/test/data/both.run/s_4_0134_sig2.txt.gz
- /usr/share/doc/staden-io-lib/test/data/both.srf.gz
- /usr/share/doc/staden-io-lib/test/data/c1#bounds.sam
- /usr/share/doc/staden-io-lib/test/data/c1#clip.sam
- /usr/share/doc/staden-io-lib/test/data/c1#pad1.sam
- /usr/share/doc/staden-io-lib/test/data/c1#pad2.sam
- /usr/share/doc/staden-io-lib/test/data/c1#pad3.sam
- /usr/share/doc/staden-io-lib/test/data/c1.fa
- /usr/share/doc/staden-io-lib/test/data/c1.fa.fai
- /usr/share/doc/staden-io-lib/test/data/ce#1.sam
- /usr/share/doc/staden-io-lib/test/data/ce#2.sam
- /usr/share/doc/staden-io-lib/test/data/ce#5.sam
- /usr/share/doc/staden-io-lib/test/data/ce#5b.sam
- /usr/share/doc/staden-io-lib/test/data/ce#5b_java.cram.gz
- /usr/share/doc/staden-io-lib/test/data/ce#5b_java.sam
- /usr/share/doc/staden-io-lib/test/data/ce#large_seq.sam.gz
- /usr/share/doc/staden-io-lib/test/data/ce#tag_depadded.sam
- /usr/share/doc/staden-io-lib/test/data/ce#tag_padded.sam
- /usr/share/doc/staden-io-lib/test/data/ce#unmap.sam
- /usr/share/doc/staden-io-lib/test/data/ce#unmap1.sam
- /usr/share/doc/staden-io-lib/test/data/ce#unmap2.sam.gz
- /usr/share/doc/staden-io-lib/test/data/ce.fa.fai
- /usr/share/doc/staden-io-lib/test/data/ce.fa.gz
- /usr/share/doc/staden-io-lib/test/data/longref.sam
- /usr/share/doc/staden-io-lib/test/data/proc.info
- /usr/share/doc/staden-io-lib/test/data/proc.srf.gz
- /usr/share/doc/staden-io-lib/test/data/proc.srf.indexed.gz
- /usr/share/doc/staden-io-lib/test/data/raw.info
- /usr/share/doc/staden-io-lib/test/data/raw.srf.gz
- /usr/share/doc/staden-io-lib/test/data/slx-C.fasta
- /usr/share/doc/staden-io-lib/test/data/slx-C.fastq
- /usr/share/doc/staden-io-lib/test/data/slx.fasta
- /usr/share/doc/staden-io-lib/test/data/slx.fastq
- /usr/share/doc/staden-io-lib/test/data/tag_aux#aux.sam
- /usr/share/doc/staden-io-lib/test/data/tag_aux#aux_java.cram
- /usr/share/doc/staden-io-lib/test/data/tag_aux#aux_java.sam
- /usr/share/doc/staden-io-lib/test/data/tag_aux#special.sam
- /usr/share/doc/staden-io-lib/test/data/tag_aux#values1.bam
- /usr/share/doc/staden-io-lib/test/data/tag_aux#values2.bam
- /usr/share/doc/staden-io-lib/test/data/tag_aux#values4.bam
- /usr/share/doc/staden-io-lib/test/data/tag_aux.fa
- /usr/share/doc/staden-io-lib/test/data/tag_aux.fa.fai
- /usr/share/doc/staden-io-lib/test/data/test_run_4_134_369_182.srf.gz
- /usr/share/doc/staden-io-lib/test/data/traces.srf
- /usr/share/doc/staden-io-lib/test/data/xx#MD.sam
- /usr/share/doc/staden-io-lib/test/data/xx#MD2.sam
- /usr/share/doc/staden-io-lib/test/data/xx#blank.sam
- /usr/share/doc/staden-io-lib/test/data/xx#large_aux.sam.gz
- /usr/share/doc/staden-io-lib/test/data/xx#large_aux2.sam
- /usr/share/doc/staden-io-lib/test/data/xx#large_aux_java.cram.gz
- /usr/share/doc/staden-io-lib/test/data/xx#large_aux_java.sam.gz
- /usr/share/doc/staden-io-lib/test/data/xx#minimal.sam
- /usr/share/doc/staden-io-lib/test/data/xx#pair.sam
- /usr/share/doc/staden-io-lib/test/data/xx#repeated.sam
- /usr/share/doc/staden-io-lib/test/data/xx#rg.sam
- /usr/share/doc/staden-io-lib/test/data/xx#triplet.sam
- /usr/share/doc/staden-io-lib/test/data/xx#unsorted.sam
- /usr/share/doc/staden-io-lib/test/data/xx.fa
- /usr/share/doc/staden-io-lib/test/data/xx.fa.fai
- /usr/share/doc/staden-io-lib/test/generate_data.pl
- /usr/share/doc/staden-io-lib/test/java.test
- /usr/share/doc/staden-io-lib/test/scram.test.gz
- /usr/share/doc/staden-io-lib/test/scram_mt30.test
- /usr/share/doc/staden-io-lib/test/scram_mt31.test
- /usr/share/doc/staden-io-lib/test/scram_mt40.test
- /usr/share/doc/staden-io-lib/test/srf2fasta.test
- /usr/share/doc/staden-io-lib/test/srf2fastq.test
- /usr/share/doc/staden-io-lib/test/srf_filter.test
- /usr/share/doc/staden-io-lib/test/srf_index.test
- /usr/share/doc/staden-io-lib/test/srf_info.test
- /usr/share/lintian/overrides/staden-io-lib-examples