Package - staden

Package:  staden
apt-get install staden
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/staden/staden_2.0.0+b11-5_amd64.deb (Size: 1.6MiB)

PropertyValue
Packagestaden
Version2.0.0+b11-5
Installed-Size4722
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.34), libgcc-s1 (>= 3.0), liblzma5 (>= 5.1.1alpha+20120614), libpng16-16t64 (>= 1.6.2), libstaden-read14t64 (>= 1.14.12), libstdc++6 (>= 5), libtcl8.6 (>= 8.6.0), libtk8.6 (>= 8.6.0), libx11-6, zlib1g (>= 1:1.1.4), staden-common (= 2.0.0+b11-5), staden-io-lib-utils, tklib
Recommendsmed-config
DescriptionDNA sequence assembly (Gap4/Gap5), editing and analysis tools
Description-md5ab389488bbaa41331fbf3a76064bea10
Homepagehttps://sourceforge.net/projects/staden/
Sectionscience
Priorityoptional
Filenamepool/main/s/staden/staden_2.0.0+b11-5_amd64.deb
Size1644780
MD5sum25456c9f4de2f2afbfad65e2b0b3c8c5
SHA256e272dfed3f9998ecbd8bcbafe92eba048f7230f3c86af06202dc93d8f9726360

Files in package

  • /usr/bin/gap4
  • /usr/bin/gap5
  • /usr/bin/pregap4
  • /usr/bin/staden
  • /usr/bin/trev
  • /usr/lib/debian-med/bin/spin
  • /usr/lib/debian-med/share/man/man1/spin.1.gz
  • /usr/lib/staden/bin/alfsplit
  • /usr/lib/staden/bin/copy_db
  • /usr/lib/staden/bin/copy_reads
  • /usr/lib/staden/bin/create_emboss_files
  • /usr/lib/staden/bin/eba
  • /usr/lib/staden/bin/find_renz
  • /usr/lib/staden/bin/gap4
  • /usr/lib/staden/bin/gap5
  • /usr/lib/staden/bin/gap5_cmd
  • /usr/lib/staden/bin/getABISampleName
  • /usr/lib/staden/bin/getABIcomment
  • /usr/lib/staden/bin/getABIdate
  • /usr/lib/staden/bin/getABIfield
  • /usr/lib/staden/bin/get_scf_field
  • /usr/lib/staden/bin/hetins
  • /usr/lib/staden/bin/init_exp
  • /usr/lib/staden/bin/make_weights
  • /usr/lib/staden/bin/mutscan
  • /usr/lib/staden/bin/polyA_clip
  • /usr/lib/staden/bin/prefinish
  • /usr/lib/staden/bin/pregap4
  • /usr/lib/staden/bin/qclip
  • /usr/lib/staden/bin/screen_seq
  • /usr/lib/staden/bin/spin
  • /usr/lib/staden/bin/staden_convert
  • /usr/lib/staden/bin/stash
  • /usr/lib/staden/bin/stops
  • /usr/lib/staden/bin/tg_index
  • /usr/lib/staden/bin/tg_index.bin
  • /usr/lib/staden/bin/tracediff
  • /usr/lib/staden/bin/trev
  • /usr/lib/staden/bin/vector_clip
  • /usr/lib/staden/libcopy_reads.so
  • /usr/lib/staden/libg.so
  • /usr/lib/staden/libgap.so
  • /usr/lib/staden/libgap5.so
  • /usr/lib/staden/libhaplo.so
  • /usr/lib/staden/libmisc.so
  • /usr/lib/staden/libmutlib.so
  • /usr/lib/staden/libprefinish.so
  • /usr/lib/staden/libprimer3.so
  • /usr/lib/staden/libseq_utils.so
  • /usr/lib/staden/libspin.so
  • /usr/lib/staden/libtext_utils.so
  • /usr/lib/staden/libtk_utils.so
  • /usr/share/applications/gap4.desktop
  • /usr/share/applications/gap5.desktop
  • /usr/share/applications/pregap4.desktop
  • /usr/share/applications/trev.desktop
  • /usr/share/bash-completion/completions/staden
  • /usr/share/doc/staden/README.Debian
  • /usr/share/doc/staden/changelog.Debian.gz
  • /usr/share/doc/staden/changelog.gz
  • /usr/share/doc/staden/copyright
  • /usr/share/man/man1/gap4.1.gz
  • /usr/share/man/man1/gap5.1.gz
  • /usr/share/man/man1/pregap4.1.gz
  • /usr/share/man/man1/trev.1.gz
  • /usr/share/staden/icon4bl.svg