Package - sspace

Package:  sspace
apt-get install sspace
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/sspace/sspace_2.1.1+dfsg-7_all.deb (Size: 1.2MiB)

PropertyValue
Packagesspace
Version2.1.1+dfsg-7
Installed-Size4651
MaintainerDebian Med Packaging Team
Architectureall
Dependsperl:any, python3:any, bowtie
Descriptionscaffolding pre-assembled contigs after extension
Description-md506f04f25cd2bcad772ca2f11e3bf6cbb
Homepagehttps://github.com/nsoranzo/sspace_basic
Sectionscience
Priorityoptional
Filenamepool/main/s/sspace/sspace_2.1.1+dfsg-7_all.deb
Size1237348
MD5sum146426436a29e9b10e5130a93c43928c
SHA256a76efd5c250b1345dc133c24475289d8113662ac0a53948798c8306f931eb370

Files in package

  • /usr/bin/sspace
  • /usr/share/doc/sspace/README.Debian
  • /usr/share/doc/sspace/README.gz
  • /usr/share/doc/sspace/changelog.Debian.gz
  • /usr/share/doc/sspace/copyright
  • /usr/share/doc/sspace/examples/contigs_abyss.fasta
  • /usr/share/doc/sspace/examples/libraries.txt
  • /usr/share/man/man1/sspace.1.gz
  • /usr/share/sspace/SSPACE_Basic.pl
  • /usr/share/sspace/SSPACE_Basic_v2.0.pl
  • /usr/share/sspace/bin/ExtendOrFormatContigs.pl
  • /usr/share/sspace/bin/PairingAndScaffolding.pl
  • /usr/share/sspace/bin/readLibFiles.pl
  • /usr/share/sspace/dotlib/DotLib.pm
  • /usr/share/sspace/tools/TQS.py
  • /usr/share/sspace/tools/TQS.readme
  • /usr/share/sspace/tools/TQSexport.py
  • /usr/share/sspace/tools/TQSfastq.py
  • /usr/share/sspace/tools/TRIMMING_PAIRED_READS.README
  • /usr/share/sspace/tools/estimate_insert_size.pl
  • /usr/share/sspace/tools/fq_all2std.pl
  • /usr/share/sspace/tools/qseq2fasta.pl
  • /usr/share/sspace/tools/qseq2fastq.pl
  • /usr/share/sspace/tools/sam_bam2tab.pl