Package - snippy

Package:  snippy
apt-get install snippy
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/s/snippy/snippy_4.6.0+dfsg-5_all.deb (Size: 26.3KiB)

PropertyValue
Packagesnippy
Version4.6.0+dfsg-5
Installed-Size100
MaintainerDebian Med Packaging Team
Architectureall
Dependsperl:any, any2fasta, bcftools, bedtools, bwa, freebayes (>= 1.3.6-2), libbio-perl-perl, libvcflib-tools, minimap2, parallel, samclip, samtools, seqtk, snp-sites, snpeff, vt
Descriptionrapid haploid variant calling and core genome alignment
Description-md569a2b5b3b56a3668e1203b1fb67096eb
Homepagehttps://github.com/tseemann/snippy/
Sectionscience
Priorityoptional
Filenamepool/main/s/snippy/snippy_4.6.0+dfsg-5_all.deb
Size26892
MD5sum55c312573e3588a17b80aa56628e8d09
SHA256d7321afb39cd81a6e334006053c013645b8b0b24afc77fe2a20312dd4c4a20ab

Files in package

  • /usr/bin/snippy
  • /usr/bin/snippy-clean_full_aln
  • /usr/bin/snippy-core
  • /usr/bin/snippy-multi
  • /usr/bin/snippy-vcf_extract_subs
  • /usr/bin/snippy-vcf_report
  • /usr/bin/snippy-vcf_to_tab
  • /usr/share/doc/snippy/README.Debian
  • /usr/share/doc/snippy/changelog.Debian.gz
  • /usr/share/doc/snippy/copyright
  • /usr/share/doc/snippy/etc/Mtb_NC_000962.3_mask.bed.gz
  • /usr/share/perl5/Snippy/Version.pm
  • /usr/share/snippy/etc/snpeff.config