Package - snakemake
Primary informations
Download package: http://deb.debian.org/debian/pool/main/s/snakemake/snakemake_7.32.4-7_all.deb (Size: 310.3KiB)| Property | Value |
|---|---|
| Package | snakemake |
| Version | 7.32.4-7 |
| Installed-Size | 1560 |
| Maintainer | Debian Med Packaging Team |
| Architecture | all |
| Depends | python3-configargparse, python3-connection-pool, python3-datrie, python3-docutils, python3-git, python3-humanfriendly, python3-jinja2 (>= 3.0~), python3-jsonschema, python3-nbformat, python3-packaging, python3-platformdirs, python3-psutil, python3-pulp (>= 2.0~), python3-requests, python3-retry, python3-smart-open (>= 3.0~), python3-stopit, python3-tabulate, python3-throttler, python3-toposort, python3-wrapt, python3-yaml, python3-yte, python3:any, ca-certificates, python3-ratelimiter, libjs-bootstrap, libjs-jquery |
| Recommends | cwltool, imagemagick, python3-tz, python3-yappi, python3-pygments, python3-azure-storage, python3-biopython, python3-boto3, python3-botocore, python3-dropbox, python3-flask, python3-ftputil, python3-irodsclient, python3-kubernetes, python3-urllib3 |
| Suggests | slurm-client, snakemake-doc |
| Description | pythonic workflow management system |
| Description-md5 | 7f9c57469c639aa1e67301b2a7ed865e |
| Homepage | https://snakemake.readthedocs.io/ |
| Section | science |
| Priority | optional |
| Filename | pool/main/s/snakemake/snakemake_7.32.4-7_all.deb |
| Size | 317768 |
| MD5sum | eb123fb77f41a14df62a9f6674816ee6 |
| SHA256 | 423dc96d06568c8384763a0d39b21a3d1329b3dd4c1a60d8c1a713b32f48801a |
Files in package
- /usr/bin/snakemake
- /usr/bin/snakemake-bash-completion
- /usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/INSTALLER
- /usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/METADATA
- /usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/WHEEL
- /usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/entry_points.txt
- /usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/top_level.txt
- /usr/lib/python3/dist-packages/snakemake/__init__.py
- /usr/lib/python3/dist-packages/snakemake/__main__.py
- /usr/lib/python3/dist-packages/snakemake/_version.py
- /usr/lib/python3/dist-packages/snakemake/benchmark.py
- /usr/lib/python3/dist-packages/snakemake/caching/__init__.py
- /usr/lib/python3/dist-packages/snakemake/caching/hash.py
- /usr/lib/python3/dist-packages/snakemake/caching/local.py
- /usr/lib/python3/dist-packages/snakemake/caching/remote.py
- /usr/lib/python3/dist-packages/snakemake/checkpoints.py
- /usr/lib/python3/dist-packages/snakemake/common/__init__.py
- /usr/lib/python3/dist-packages/snakemake/common/tbdstring.py
- /usr/lib/python3/dist-packages/snakemake/cwl.py
- /usr/lib/python3/dist-packages/snakemake/dag.py
- /usr/lib/python3/dist-packages/snakemake/decorators.py
- /usr/lib/python3/dist-packages/snakemake/deployment/__init__.py
- /usr/lib/python3/dist-packages/snakemake/deployment/conda.py
- /usr/lib/python3/dist-packages/snakemake/deployment/containerize.py
- /usr/lib/python3/dist-packages/snakemake/deployment/env_modules.py
- /usr/lib/python3/dist-packages/snakemake/deployment/singularity.py
- /usr/lib/python3/dist-packages/snakemake/exceptions.py
- /usr/lib/python3/dist-packages/snakemake/executors/__init__.py
- /usr/lib/python3/dist-packages/snakemake/executors/azure_batch.py
- /usr/lib/python3/dist-packages/snakemake/executors/common.py
- /usr/lib/python3/dist-packages/snakemake/executors/flux.py
- /usr/lib/python3/dist-packages/snakemake/executors/ga4gh_tes.py
- /usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences.py
- /usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences_helper.py
- /usr/lib/python3/dist-packages/snakemake/executors/jobscript.sh
- /usr/lib/python3/dist-packages/snakemake/executors/slurm/__init__.py
- /usr/lib/python3/dist-packages/snakemake/executors/slurm/slurm_jobstep.py
- /usr/lib/python3/dist-packages/snakemake/executors/slurm/slurm_submit.py
- /usr/lib/python3/dist-packages/snakemake/gui.html
- /usr/lib/python3/dist-packages/snakemake/gui.py
- /usr/lib/python3/dist-packages/snakemake/interfaces.py
- /usr/lib/python3/dist-packages/snakemake/io.py
- /usr/lib/python3/dist-packages/snakemake/jobs.py
- /usr/lib/python3/dist-packages/snakemake/linting/__init__.py
- /usr/lib/python3/dist-packages/snakemake/linting/links.py
- /usr/lib/python3/dist-packages/snakemake/linting/rules.py
- /usr/lib/python3/dist-packages/snakemake/linting/snakefiles.py
- /usr/lib/python3/dist-packages/snakemake/logging.py
- /usr/lib/python3/dist-packages/snakemake/modules.py
- /usr/lib/python3/dist-packages/snakemake/notebook.py
- /usr/lib/python3/dist-packages/snakemake/output_index.py
- /usr/lib/python3/dist-packages/snakemake/parser.py
- /usr/lib/python3/dist-packages/snakemake/path_modifier.py
- /usr/lib/python3/dist-packages/snakemake/persistence.py
- /usr/lib/python3/dist-packages/snakemake/profiles.py
- /usr/lib/python3/dist-packages/snakemake/remote/AzBlob.py
- /usr/lib/python3/dist-packages/snakemake/remote/EGA.py
- /usr/lib/python3/dist-packages/snakemake/remote/FTP.py
- /usr/lib/python3/dist-packages/snakemake/remote/GS.py
- /usr/lib/python3/dist-packages/snakemake/remote/HTTP.py
- /usr/lib/python3/dist-packages/snakemake/remote/NCBI.py
- /usr/lib/python3/dist-packages/snakemake/remote/S3.py
- /usr/lib/python3/dist-packages/snakemake/remote/S3Mocked.py
- /usr/lib/python3/dist-packages/snakemake/remote/SFTP.py
- /usr/lib/python3/dist-packages/snakemake/remote/XRootD.py
- /usr/lib/python3/dist-packages/snakemake/remote/__init__.py
- /usr/lib/python3/dist-packages/snakemake/remote/dropbox.py
- /usr/lib/python3/dist-packages/snakemake/remote/gfal.py
- /usr/lib/python3/dist-packages/snakemake/remote/gridftp.py
- /usr/lib/python3/dist-packages/snakemake/remote/iRODS.py
- /usr/lib/python3/dist-packages/snakemake/remote/webdav.py
- /usr/lib/python3/dist-packages/snakemake/remote/zenodo.py
- /usr/lib/python3/dist-packages/snakemake/report.css
- /usr/lib/python3/dist-packages/snakemake/report/__init__.py
- /usr/lib/python3/dist-packages/snakemake/report/data/__init__.py
- /usr/lib/python3/dist-packages/snakemake/report/data/categories.py
- /usr/lib/python3/dist-packages/snakemake/report/data/common.py
- /usr/lib/python3/dist-packages/snakemake/report/data/packages.py
- /usr/lib/python3/dist-packages/snakemake/report/data/results.py
- /usr/lib/python3/dist-packages/snakemake/report/data/rulegraph.py
- /usr/lib/python3/dist-packages/snakemake/report/data/rules.py
- /usr/lib/python3/dist-packages/snakemake/report/data/runtimes.py
- /usr/lib/python3/dist-packages/snakemake/report/data/timeline.py
- /usr/lib/python3/dist-packages/snakemake/report/rulegraph_spec.py
- /usr/lib/python3/dist-packages/snakemake/report/template/__init__.py
- /usr/lib/python3/dist-packages/snakemake/report/template/components/__init__.py
- /usr/lib/python3/dist-packages/snakemake/report/template/components/abstract_menu.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/abstract_results.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/app.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/breadcrumbs.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/button.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/category.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/common.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/content.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/icon.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/list_heading.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/list_item.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/menu.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/navbar.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/report_info.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/result_info.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/result_view_button.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/rule_graph.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/rule_info.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/search_results.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/stats.js
- /usr/lib/python3/dist-packages/snakemake/report/template/components/subcategory.js
- /usr/lib/python3/dist-packages/snakemake/report/template/index.html.jinja2
- /usr/lib/python3/dist-packages/snakemake/report/template/logo.svg
- /usr/lib/python3/dist-packages/snakemake/report/template/style.css
- /usr/lib/python3/dist-packages/snakemake/resources.py
- /usr/lib/python3/dist-packages/snakemake/ruleinfo.py
- /usr/lib/python3/dist-packages/snakemake/rules.py
- /usr/lib/python3/dist-packages/snakemake/scheduler.py
- /usr/lib/python3/dist-packages/snakemake/script.py
- /usr/lib/python3/dist-packages/snakemake/shell.py
- /usr/lib/python3/dist-packages/snakemake/sourcecache.py
- /usr/lib/python3/dist-packages/snakemake/stats.py
- /usr/lib/python3/dist-packages/snakemake/target_jobs.py
- /usr/lib/python3/dist-packages/snakemake/template_rendering/__init__.py
- /usr/lib/python3/dist-packages/snakemake/template_rendering/jinja2.py
- /usr/lib/python3/dist-packages/snakemake/template_rendering/yte.py
- /usr/lib/python3/dist-packages/snakemake/unit_tests/__init__.py
- /usr/lib/python3/dist-packages/snakemake/unit_tests/templates/__init__.py
- /usr/lib/python3/dist-packages/snakemake/unit_tests/templates/common.py.jinja2
- /usr/lib/python3/dist-packages/snakemake/unit_tests/templates/ruletest.py.jinja2
- /usr/lib/python3/dist-packages/snakemake/utils.py
- /usr/lib/python3/dist-packages/snakemake/workflow.py
- /usr/lib/python3/dist-packages/snakemake/wrapper.py
- /usr/share/doc/snakemake/changelog.Debian.gz
- /usr/share/doc/snakemake/changelog.gz
- /usr/share/doc/snakemake/copyright
- /usr/share/lintian/overrides/snakemake
- /usr/share/man/man1/snakemake.1.gz