Package - resfinder-example

Package: resfinder-example
apt-get install resfinder-example

Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/resfinder/resfinder-example_4.4.2-2_all.deb (Size: 561.4KiB)

Property	Value
Package	resfinder-example
Source	resfinder
Version	4.4.2-2
Installed-Size	858
Maintainer	Debian Med Packaging Team
Architecture	all
Recommends	resfinder
Description	identify acquired antimicrobial resistance genes (example data)
Description-md5	b1c2e96cc2068944760d609b9beaea60
Multi-Arch	foreign
Homepage	https://bitbucket.org/genomicepidemiology/resfinder
Section	science
Priority	optional
Filename	pool/main/r/resfinder/resfinder-example_4.4.2-2_all.deb
Size	574852
MD5sum	117d4b6abaae20f5c46837eefb16ff8e
SHA256	eaeb3c535d7e9c03da449599dfc5b2133b13923f3d1c1fb91738aedc76d96b04

Files in package

/usr/share/doc/resfinder-example/changelog.Debian.gz
/usr/share/doc/resfinder-example/changelog.gz
/usr/share/doc/resfinder-example/copyright
/usr/share/doc/resfinder/examples/data/env_var_test_fail.md
/usr/share/doc/resfinder/examples/data/test_isolate_01.fa.gz
/usr/share/doc/resfinder/examples/data/test_isolate_01_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_01_2.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_02.fa
/usr/share/doc/resfinder/examples/data/test_isolate_03.fa.gz
/usr/share/doc/resfinder/examples/data/test_isolate_05.fa.gz
/usr/share/doc/resfinder/examples/data/test_isolate_05_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_05_2.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_09a.fa
/usr/share/doc/resfinder/examples/data/test_isolate_09a_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_09a_2.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_09b.fa
/usr/share/doc/resfinder/examples/data/test_isolate_09b_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_09b_2.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_10.fa
/usr/share/doc/resfinder/examples/data/test_isolate_11.fa
/usr/share/doc/resfinder/examples/data/test_isolate_11_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_11_2.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_12.fa
/usr/share/doc/resfinder/examples/data/test_isolate_14.fa
/usr/share/doc/resfinder/examples/data/test_isolate_14_1.fq.gz
/usr/share/doc/resfinder/examples/data/test_isolate_14_2.fq.gz
/usr/share/doc/resfinder/examples/data/wdl_input.tsv
/usr/share/doc/resfinder/examples/db_pointfinder/INSTALL.py.gz
/usr/share/doc/resfinder/examples/db_pointfinder/README.md.gz
/usr/share/doc/resfinder/examples/db_pointfinder/VERSION
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/23S.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/campylobacter.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/gyrA.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/gyrA_2.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/phenotypes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/resistens-overview.txt
/usr/share/doc/resfinder/examples/db_pointfinder/campylobacter/rpsL.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/config
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/enterococcus_faecalis.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/phenotypes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecalis/resistens-overview.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/enterococcus_faecium.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/pbp5.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/enterococcus_faecium/resistens-overview.txt
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/16S-rrsB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/16S-rrsC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/16S-rrsH.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/23S.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/ampC-promoter-size-53bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/escherichia_coli.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/folP.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/gyrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/parE.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/pmrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/pmrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/escherichia_coli/rpoB.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/helicobacter_pylori.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/phenotypes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/resistens-overview.txt
/usr/share/doc/resfinder/examples/db_pointfinder/helicobacter_pylori/rpoB.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/acrR.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/gene_accessions.txt
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/gyrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/klebsiella.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/ompK35.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/ompK36.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/ompK37.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/ramR.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/retired_genes/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/retired_genes/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/klebsiella/rpsL.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/Rv0678.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/ahpC-promoter-size-180bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/alr.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/drrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/eis-promoter-size-119bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/embA-promoter-size-115bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/embB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/embC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/embR.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/ethA-promoter-size-74bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/ethR.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/fabG1-promoter-size-223bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/folC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/gidB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/gyrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/idsA2-promoter-size-181bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/inhA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/iniA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/kasA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/katG-promoter-size-107bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/mycobacterium_tuberculosis.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/nuoA-promoter-size-365bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/panD.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/pncA-promoter-size-107bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/ribD.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rplC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rpoB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rpoC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rpsA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rpsL.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rrl.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/rrs.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/thyA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/thyX-promoter-size-259bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/tlyA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/mycobacterium_tuberculosis/ubiA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/16S-rRNA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/23S-rRNA-a1.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/23S-rRNA-a2.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/23S-rRNA-a3.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/23S-rRNA-a4.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/macAB-promoter-size-225bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/mtrC-promoter-size-174bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/mtrR-promoter-size-66bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/neisseria_gonorrhoeae.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/penA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/pilQ.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/ponA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/porB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/rpsE.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/neisseria_gonorrhoeae/rpsJ.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/CRT.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/DHFR.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/DHPS.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/K13.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/MDR.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/PIP.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/config
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/phenotypes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/plasmodium_falciparum.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/plasmodium_falciparum/resistens-overview.txt
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/16S-rrsD.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/acrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/gyrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/parC.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/parE.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/pmrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/pmrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/salmonella/salmonella.fsa.gz
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/23S.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/RNA_genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/dfrB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/fusA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/genes.txt
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/grlA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/grlB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/gyrA.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/ileS.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/pbp2.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/pbp4-promoter-size-304bp.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/pbp4.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/phenotypes.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/resistens-overview.txt.gz
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/rpoB.fsa
/usr/share/doc/resfinder/examples/db_pointfinder/staphylococcus_aureus/staphylococcus_aureus.fsa.gz
/usr/share/doc/resfinder/examples/deprecated/functional_tests.py.gz
/usr/share/doc/resfinder/examples/deprecated/unit_tests.py
/usr/share/doc/resfinder/examples/resfinder/cge/output/test_gene_result.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/output/test_phenotype_result.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/output/test_seq_variation_result.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/output/test_std_results.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/phenotype2genotype/test_antibiotics.md
/usr/share/doc/resfinder/examples/resfinder/cge/phenotype2genotype/test_isolate.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/test_config.md.gz
/usr/share/doc/resfinder/examples/resfinder/cge/test_pointfinder.md
/usr/share/doc/resfinder/examples/resfinder/test_run_resfinder.md
/usr/share/doc/resfinder/run-unit-test