Package - resfinder

Package:  resfinder
apt-get install resfinder
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/resfinder/resfinder_4.4.2-2_all.deb (Size: 66.4KiB)

PropertyValue
Packageresfinder
Version4.4.2-2
Installed-Size402
MaintainerDebian Med Packaging Team
Architectureall
Dependspython3:any, resfinder-db, python3-cgecore, python3-tabulate, ncbi-blast+-legacy, kma, python3-git, python3-dateutil, python3-cgelib
Descriptionidentify acquired antimicrobial resistance genes
Description-md5cce3ff3cc36c4c2328391a5521af12c8
Homepagehttps://bitbucket.org/genomicepidemiology/resfinder
Sectionscience
Priorityoptional
Filenamepool/main/r/resfinder/resfinder_4.4.2-2_all.deb
Size67988
MD5sum5ac3887582571c40fe761fe95b3494d0
SHA2569bf9bb64dabca2f4aebf075744d44eab3210970fbf335ee1f221eb3fd54a838a

Files in package

  • /usr/bin/run_resfinder.py
  • /usr/lib/python3/dist-packages/resfinder/__init__.py
  • /usr/lib/python3/dist-packages/resfinder/__main__.py
  • /usr/lib/python3/dist-packages/resfinder/amr_abbreviations.md
  • /usr/lib/python3/dist-packages/resfinder/cge/__init__.py
  • /usr/lib/python3/dist-packages/resfinder/cge/config.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/__init__.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/exceptions.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/gene_result.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/orderedset.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/phenotype_result.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/seq_variation_result.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/std_results.py
  • /usr/lib/python3/dist-packages/resfinder/cge/output/table.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/__init__.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/abclassdef.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/dbhit.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/feature.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/isolate.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/phenodbpoint.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/phenotype.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/res_profile.py
  • /usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/res_sumtable.py
  • /usr/lib/python3/dist-packages/resfinder/cge/pointfinder.py
  • /usr/lib/python3/dist-packages/resfinder/cge/resfinder.py
  • /usr/lib/python3/dist-packages/resfinder/cge/runinfo.py
  • /usr/lib/python3/dist-packages/resfinder/environment_variables.md
  • /usr/lib/python3/dist-packages/resfinder/species_abbreviations.md
  • /usr/share/doc/resfinder/README.Debian
  • /usr/share/doc/resfinder/README.test
  • /usr/share/doc/resfinder/changelog.Debian.gz
  • /usr/share/doc/resfinder/changelog.gz
  • /usr/share/doc/resfinder/copyright
  • /usr/share/man/man1/run_resfinder.py.1.gz
  • /usr/share/python3/runtime.d/resfinder.rtupdate
  • /usr/share/resfinder/run_resfinder.py
  • /usr/share/resfinder/scripts/env_variables.txt
  • /usr/share/resfinder/scripts/fparseJSONtoRESULTS.py
  • /usr/share/resfinder/scripts/get_commits_etc.py
  • /usr/share/resfinder/scripts/install_resfinder.sh
  • /usr/share/resfinder/scripts/run_indexes.sh
  • /usr/share/resfinder/scripts/wdl/README.md
  • /usr/share/resfinder/scripts/wdl/computerome.conf
  • /usr/share/resfinder/scripts/wdl/input.json
  • /usr/share/resfinder/scripts/wdl/resfinder.wdl