Package - r-cran-susier

Package: r-cran-susier
apt-get install r-cran-susier

Documentations in package:

r-cran-susier

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-cran-susier/r-cran-susier_0.12.35+dfsg-1_all.deb (Size: 1.7MiB)

Property	Value
Package	r-cran-susier
Version	0.12.35+dfsg-1
Installed-Size	1944
Maintainer	Debian R Packages Maintainers
Architecture	all
Depends	r-base-core (>= 4.2.2.20221110-2), r-api-4.0, r-cran-matrix, r-cran-matrixstats, r-cran-mixsqp, r-cran-reshape, r-cran-crayon, r-cran-ggplot2, python3
Recommends	r-cran-testthat
Suggests	r-cran-curl, r-cran-knitr, r-cran-rmarkdown, r-cran-cowplot, caviar, finemap
Description	GNU R sum of single effects linear regression
Description-md5	7fce5689bece233e636964890d018a59
Homepage	https://cran.r-project.org/package=susieR
Section	gnu-r
Priority	optional
Filename	pool/main/r/r-cran-susier/r-cran-susier_0.12.35+dfsg-1_all.deb
Size	1795072
MD5sum	bbbd4745d2a06b8a7c4614e736ab2f0a
SHA256	6ea0d0cedd7ffa42510a206c7435aa34273f0863ad91bbbb3aa0c3868e68ac07

Files in package

/usr/lib/R/site-library/susieR/CITATION
/usr/lib/R/site-library/susieR/DESCRIPTION
/usr/lib/R/site-library/susieR/INDEX
/usr/lib/R/site-library/susieR/Meta/Rd.rds
/usr/lib/R/site-library/susieR/Meta/data.rds
/usr/lib/R/site-library/susieR/Meta/features.rds
/usr/lib/R/site-library/susieR/Meta/hsearch.rds
/usr/lib/R/site-library/susieR/Meta/links.rds
/usr/lib/R/site-library/susieR/Meta/nsInfo.rds
/usr/lib/R/site-library/susieR/Meta/package.rds
/usr/lib/R/site-library/susieR/Meta/vignette.rds
/usr/lib/R/site-library/susieR/NAMESPACE
/usr/lib/R/site-library/susieR/R/susieR
/usr/lib/R/site-library/susieR/R/susieR.rdb
/usr/lib/R/site-library/susieR/R/susieR.rdx
/usr/lib/R/site-library/susieR/analysis/optimize.Rmd
/usr/lib/R/site-library/susieR/analysis/test_susie_auto.Rmd
/usr/lib/R/site-library/susieR/analysis/testing.Rmd
/usr/lib/R/site-library/susieR/code/caviar.R
/usr/lib/R/site-library/susieR/code/compute_ss_memory.R
/usr/lib/R/site-library/susieR/code/dap-g.py
/usr/lib/R/site-library/susieR/code/finemap.R
/usr/lib/R/site-library/susieR/code/finemap_1p4.R
/usr/lib/R/site-library/susieR/code/gen_original_results.R
/usr/lib/R/site-library/susieR/code/monitor_memory.py
/usr/lib/R/site-library/susieR/code/sparse_matrix_strategy.Rmd
/usr/lib/R/site-library/susieR/code/susie_memory.R
/usr/lib/R/site-library/susieR/code/susie_rss_memory.R
/usr/lib/R/site-library/susieR/data/Rdata.rdb
/usr/lib/R/site-library/susieR/data/Rdata.rds
/usr/lib/R/site-library/susieR/data/Rdata.rdx
/usr/lib/R/site-library/susieR/datafiles/N3finemapping.CAVIAR.RData
/usr/lib/R/site-library/susieR/datafiles/N3finemapping.DAP.RData
/usr/lib/R/site-library/susieR/datafiles/N3finemapping.FINEMAP.RData
/usr/lib/R/site-library/susieR/doc/finemapping.R
/usr/lib/R/site-library/susieR/doc/finemapping.Rmd
/usr/lib/R/site-library/susieR/doc/finemapping_summary_statistics.R
/usr/lib/R/site-library/susieR/doc/finemapping_summary_statistics.Rmd
/usr/lib/R/site-library/susieR/doc/index.html
/usr/lib/R/site-library/susieR/doc/mwe.R
/usr/lib/R/site-library/susieR/doc/mwe.Rmd
/usr/lib/R/site-library/susieR/doc/sparse_susie_eval.R
/usr/lib/R/site-library/susieR/doc/sparse_susie_eval.Rmd
/usr/lib/R/site-library/susieR/doc/susie_refine.R
/usr/lib/R/site-library/susieR/doc/susie_refine.Rmd
/usr/lib/R/site-library/susieR/doc/susie_rss.R
/usr/lib/R/site-library/susieR/doc/susie_rss.Rmd
/usr/lib/R/site-library/susieR/doc/susierss_diagnostic.R
/usr/lib/R/site-library/susieR/doc/susierss_diagnostic.Rmd
/usr/lib/R/site-library/susieR/doc/trend_filtering.R
/usr/lib/R/site-library/susieR/doc/trend_filtering.Rmd
/usr/lib/R/site-library/susieR/doc/trendfiltering_derivations.Rnw
/usr/lib/R/site-library/susieR/doc/trendfiltering_derivations.pdf
/usr/lib/R/site-library/susieR/help/AnIndex
/usr/lib/R/site-library/susieR/help/aliases.rds
/usr/lib/R/site-library/susieR/help/paths.rds
/usr/lib/R/site-library/susieR/help/susieR.rdb
/usr/lib/R/site-library/susieR/help/susieR.rdx
/usr/lib/R/site-library/susieR/html/00Index.html
/usr/lib/R/site-library/susieR/html/R.css
/usr/lib/R/site-library/susieR/misc/post-commit.sh
/usr/lib/R/site-library/susieR/misc/pre-commit.sh
/usr/share/doc/r-cran-susier/changelog.Debian.gz
/usr/share/doc/r-cran-susier/copyright
/usr/share/doc/r-cran-susier/run-unit-test
/usr/share/doc/r-cran-susier/tests/README.md
/usr/share/doc/r-cran-susier/tests/testthat.R
/usr/share/doc/r-cran-susier/tests/testthat/ER2_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/ER2_rss_lambda0_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/ER2_rss_lambda1_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/Eloglik_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/Eloglik_rss_lambda0_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/Eloglik_rss_lambda1_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/SER_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/SER_rss_lambda0_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/SER_rss_lambda1_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/est_V_debug.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/helper_testthat.R.gz
/usr/share/doc/r-cran-susier/tests/testthat/objective_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/objective_rss_lambda0_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/objective_rss_lambda1_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/singleReg_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/singleReg_rss_lambda0_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/singleReg_rss_lambda1_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susiefit_original_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susiefit_original_res2.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susiefit_original_res3.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susiefit_original_res4.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susierssfit_lambda0_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/susierssfit_lambda1_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/test_Eloglik.R
/usr/share/doc/r-cran-susier/tests/testthat/test_Eloglik_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/test_SER_posterior_e_loglik.R
/usr/share/doc/r-cran-susier/tests/testthat/test_SER_posterior_e_loglik_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/test_comput_tf.R
/usr/share/doc/r-cran-susier/tests/testthat/test_compute_colsds.R
/usr/share/doc/r-cran-susier/tests/testthat/test_est_V.R
/usr/share/doc/r-cran-susier/tests/testthat/test_get_ER2.R
/usr/share/doc/r-cran-susier/tests/testthat/test_get_ER2_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/test_get_pip.R
/usr/share/doc/r-cran-susier/tests/testthat/test_get_samples.R
/usr/share/doc/r-cran-susier/tests/testthat/test_init.R
/usr/share/doc/r-cran-susier/tests/testthat/test_intercept_standardize.R
/usr/share/doc/r-cran-susier/tests/testthat/test_null_weight.R
/usr/share/doc/r-cran-susier/tests/testthat/test_prior_weights.R
/usr/share/doc/r-cran-susier/tests/testthat/test_single_effect_regression.R
/usr/share/doc/r-cran-susier/tests/testthat/test_single_effect_regression_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/test_small_resid.R
/usr/share/doc/r-cran-susier/tests/testthat/test_sparse_multiplication.R
/usr/share/doc/r-cran-susier/tests/testthat/test_sparse_safe_colScale.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_XtX_Xty.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_beta_se.R.gz
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_get_cs.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_get_objective.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_rss_get_objective.R
/usr/share/doc/r-cran-susier/tests/testthat/test_susie_trendfilter.R.gz
/usr/share/doc/r-cran-susier/tests/testthat/test_update_each_effect.R
/usr/share/doc/r-cran-susier/tests/testthat/test_update_each_effect_rss.R
/usr/share/doc/r-cran-susier/tests/testthat/vbupdate_original_res.rds
/usr/share/doc/r-cran-susier/tests/testthat/vbupdate_rss_lambda0_res.rds.gz
/usr/share/doc/r-cran-susier/tests/testthat/vbupdate_rss_lambda1_res.rds.gz