Package - r-cran-seurat
Primary informations
Download package: http://deb.debian.org/debian/pool/main/r/r-cran-seurat/r-cran-seurat_5.2.1-5_amd64.deb (Size: 3.1MiB)| Property | Value |
|---|---|
| Package | r-cran-seurat |
| Version | 5.2.1-5 |
| Installed-Size | 4330 |
| Maintainer | Debian R Packages Maintainers |
| Architecture | amd64 |
| Depends | r-api-4.0, r-cran-seuratobject (>= 5.0.2), r-cran-cluster, r-cran-cowplot, r-cran-fastdummies, r-cran-fitdistrplus, r-cran-future, r-cran-future.apply, r-cran-generics (>= 0.1.3), r-cran-ggplot2 (>= 3.3.0), r-cran-ggrepel, r-cran-ggridges, r-cran-httr, r-cran-ica, r-cran-igraph, r-cran-irlba, r-cran-jsonlite, r-cran-kernsmooth, r-cran-leidenbase, r-cran-lifecycle, r-cran-lmtest, r-cran-mass, r-cran-matrix (>= 1.5-0), r-cran-matrixstats, r-cran-miniui, r-cran-patchwork, r-cran-pbapply, r-cran-plotly (>= 4.9.0), r-cran-png, r-cran-progressr, r-cran-rann, r-cran-rcolorbrewer, r-cran-rcpp (>= 1.0.7), r-cran-rcppannoy (>= 0.0.18), r-cran-rcpphnsw, r-cran-reticulate, r-cran-rlang, r-cran-rocr, r-cran-rspectra, r-cran-rtsne, r-cran-scales, r-cran-scattermore (>= 1.2), r-cran-sctransform (>= 0.4.1), r-cran-shiny, r-cran-spatstat.explore, r-cran-spatstat.geom, r-cran-tibble, r-cran-uwot (>= 0.1.10), r-cran-rcppeigen, r-cran-rcppprogress, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 14) |
| Recommends | r-cran-ape, r-bioc-biobase, r-bioc-biocgenerics, r-cran-data.table, r-bioc-deseq2, r-bioc-delayedarray, r-bioc-genomicranges, r-bioc-genomeinfodb, r-bioc-glmgampoi, r-cran-ggrastr, r-cran-hdf5r, r-bioc-iranges, r-bioc-limma, r-cran-metap, r-cran-mixtools, r-bioc-monocle, r-cran-rsvd, r-cran-r.utils, r-bioc-rtracklayer, r-bioc-s4vectors, r-cran-sf (>= 1.0-0), r-bioc-singlecellexperiment, r-bioc-summarizedexperiment, r-cran-testthat, r-cran-vgam |
| Description | Tools for Single Cell Genomics |
| Description-md5 | e659572039d49e2404d6bbc88edb145d |
| Homepage | https://cran.r-project.org/package=Seurat |
| Section | gnu-r |
| Priority | optional |
| Filename | pool/main/r/r-cran-seurat/r-cran-seurat_5.2.1-5_amd64.deb |
| Size | 3281048 |
| MD5sum | fb6ecea5ded36a5f875fa59ba811dbe7 |
| SHA256 | a759491daf65da817ff69f74f4db77692a18d37b21a5f7f5f4566eb4295ba835 |
Files in package
- /usr/lib/R/site-library/Seurat/CITATION
- /usr/lib/R/site-library/Seurat/DESCRIPTION
- /usr/lib/R/site-library/Seurat/INDEX
- /usr/lib/R/site-library/Seurat/Meta/Rd.rds
- /usr/lib/R/site-library/Seurat/Meta/data.rds
- /usr/lib/R/site-library/Seurat/Meta/features.rds
- /usr/lib/R/site-library/Seurat/Meta/hsearch.rds
- /usr/lib/R/site-library/Seurat/Meta/links.rds
- /usr/lib/R/site-library/Seurat/Meta/nsInfo.rds
- /usr/lib/R/site-library/Seurat/Meta/package.rds
- /usr/lib/R/site-library/Seurat/NAMESPACE
- /usr/lib/R/site-library/Seurat/NEWS.md
- /usr/lib/R/site-library/Seurat/R/Seurat
- /usr/lib/R/site-library/Seurat/R/Seurat.rdb
- /usr/lib/R/site-library/Seurat/R/Seurat.rdx
- /usr/lib/R/site-library/Seurat/data/Rdata.rdb
- /usr/lib/R/site-library/Seurat/data/Rdata.rds
- /usr/lib/R/site-library/Seurat/data/Rdata.rdx
- /usr/lib/R/site-library/Seurat/extdata/pbmc_raw.txt
- /usr/lib/R/site-library/Seurat/help/AnIndex
- /usr/lib/R/site-library/Seurat/help/Seurat.rdb
- /usr/lib/R/site-library/Seurat/help/Seurat.rdx
- /usr/lib/R/site-library/Seurat/help/aliases.rds
- /usr/lib/R/site-library/Seurat/help/paths.rds
- /usr/lib/R/site-library/Seurat/html/00Index.html
- /usr/lib/R/site-library/Seurat/html/R.css
- /usr/lib/R/site-library/Seurat/libs/Seurat.so
- /usr/share/doc/r-cran-seurat/changelog.Debian.gz
- /usr/share/doc/r-cran-seurat/copyright
- /usr/share/doc/r-cran-seurat/run-unit-test
- /usr/share/doc/r-cran-seurat/tests/testdata/barcodes.tsv
- /usr/share/doc/r-cran-seurat/tests/testdata/cr3.0/barcodes.tsv.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/cr3.0/features.tsv.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/cr3.0/matrix.mtx.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/genes.tsv.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/matrix.mtx.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/nbt_small.Rdata.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium/filtered_feature_bc_matrix.h5.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium/spatial/scalefactors_json.json
- /usr/share/doc/r-cran-seurat/tests/testdata/visium/spatial/tissue_hires_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium/spatial/tissue_lowres_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium/spatial/tissue_positions_list.csv.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_008um/filtered_feature_bc_matrix.h5.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_008um/spatial/scalefactors_json.json
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_008um/spatial/tissue_hires_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_008um/spatial/tissue_lowres_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_008um/spatial/tissue_positions.parquet.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_016um/filtered_feature_bc_matrix.h5.gz
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_016um/spatial/scalefactors_json.json
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_016um/spatial/tissue_hires_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_016um/spatial/tissue_lowres_image.png
- /usr/share/doc/r-cran-seurat/tests/testdata/visium_hd/binned_outputs/square_016um/spatial/tissue_positions.parquet.gz
- /usr/share/doc/r-cran-seurat/tests/testthat.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_data_manipulation.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_differential_expression.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_dimensional_reduction.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_find_clusters.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_integratedata.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_integration.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_integration5.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_load_10X.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_modularity_optimizer.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_objects.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_preprocessing.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_read_mtx.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_sketching.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_spatial.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_transferdata.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_tree.R
- /usr/share/doc/r-cran-seurat/tests/testthat/test_utilities.R.gz
- /usr/share/doc/r-cran-seurat/tests/testthat/test_visualization.R