Package - r-bioc-txdbmaker
Primary informations
Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-txdbmaker/r-bioc-txdbmaker_1.2.1+ds-2_all.deb (Size: 723.2KiB)| Property | Value |
|---|---|
| Package | r-bioc-txdbmaker |
| Version | 1.2.1+ds-2 |
| Installed-Size | 3053 |
| Maintainer | Debian R Packages Maintainers |
| Architecture | all |
| Depends | r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics, r-bioc-s4vectors, r-bioc-genomeinfodb (>= 1.39.9), r-bioc-genomicranges, r-bioc-genomicfeatures, r-cran-httr, r-cran-rjson, r-cran-dbi, r-cran-rsqlite (>= 2.0), r-bioc-iranges, r-bioc-ucsc.utils, r-bioc-annotationdbi, r-bioc-biobase, r-bioc-biocio, r-bioc-rtracklayer, r-bioc-biomart (>= 2.59.1) |
| Suggests | r-cran-rmariadb, r-bioc-ensembldb, r-cran-runit, r-bioc-biocstyle, r-cran-knitr |
| Description | Tools for making TxDb objects from genomic annotations |
| Description-md5 | 27bb969c21a2fae15821971331f58fb1 |
| Homepage | https://bioconductor.org/packages/txdbmaker |
| Section | gnu-r |
| Priority | optional |
| Filename | pool/main/r/r-bioc-txdbmaker/r-bioc-txdbmaker_1.2.1+ds-2_all.deb |
| Size | 740576 |
| MD5sum | ee324e4a4d63b6630f698b31476c459d |
| SHA256 | 19479ebfa8d4d97c663009e07c2f1a90979d9c25b2bb7298f47b8beaac5186fa |
Files in package
- /usr/lib/R/site-library/txdbmaker/DESCRIPTION
- /usr/lib/R/site-library/txdbmaker/INDEX
- /usr/lib/R/site-library/txdbmaker/Meta/Rd.rds
- /usr/lib/R/site-library/txdbmaker/Meta/features.rds
- /usr/lib/R/site-library/txdbmaker/Meta/hsearch.rds
- /usr/lib/R/site-library/txdbmaker/Meta/links.rds
- /usr/lib/R/site-library/txdbmaker/Meta/nsInfo.rds
- /usr/lib/R/site-library/txdbmaker/Meta/package.rds
- /usr/lib/R/site-library/txdbmaker/Meta/vignette.rds
- /usr/lib/R/site-library/txdbmaker/NAMESPACE
- /usr/lib/R/site-library/txdbmaker/NEWS
- /usr/lib/R/site-library/txdbmaker/R/txdbmaker
- /usr/lib/R/site-library/txdbmaker/R/txdbmaker.rdb
- /usr/lib/R/site-library/txdbmaker/R/txdbmaker.rdx
- /usr/lib/R/site-library/txdbmaker/doc/index.html
- /usr/lib/R/site-library/txdbmaker/doc/txdbmaker.R
- /usr/lib/R/site-library/txdbmaker/doc/txdbmaker.Rmd
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/GCF_000020065.1_ASM2006v1_genomic.gff
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/TheCanonicalGene_v1.gff3
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/TheCanonicalGene_v2.gff3
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/a.gff3
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/a.sqlite
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/dmel-1000-r5.11.filtered.gff
- /usr/lib/R/site-library/txdbmaker/extdata/GFF3_files/dmel-1000-r5.11.filtered.sqlite
- /usr/lib/R/site-library/txdbmaker/extdata/GTF_files/GCA_002204515.1_AaegL5.0_genomic.gtf.gz
- /usr/lib/R/site-library/txdbmaker/extdata/GTF_files/GCA_002204515.1_AaegL5.0_genomic.sqlite
- /usr/lib/R/site-library/txdbmaker/extdata/GTF_files/test1.gtf
- /usr/lib/R/site-library/txdbmaker/extdata/README.txt
- /usr/lib/R/site-library/txdbmaker/extdata/sacCer2_sgdGene_txdb.sqlite
- /usr/lib/R/site-library/txdbmaker/help/AnIndex
- /usr/lib/R/site-library/txdbmaker/help/aliases.rds
- /usr/lib/R/site-library/txdbmaker/help/paths.rds
- /usr/lib/R/site-library/txdbmaker/help/txdbmaker.rdb
- /usr/lib/R/site-library/txdbmaker/help/txdbmaker.rdx
- /usr/lib/R/site-library/txdbmaker/html/00Index.html
- /usr/lib/R/site-library/txdbmaker/html/R.css
- /usr/lib/R/site-library/txdbmaker/scripts/make_TxDbs.R
- /usr/lib/R/site-library/txdbmaker/scripts/make_tRNAFDb.R
- /usr/lib/R/site-library/txdbmaker/txdb-template/DESCRIPTION
- /usr/lib/R/site-library/txdbmaker/txdb-template/NAMESPACE
- /usr/lib/R/site-library/txdbmaker/txdb-template/R/zzz.R
- /usr/lib/R/site-library/txdbmaker/txdb-template/man/package.Rd
- /usr/lib/R/site-library/txdbmaker/unitTests/test_makeTxDb.R
- /usr/lib/R/site-library/txdbmaker/unitTests/test_makeTxDbFromBiomart.R
- /usr/lib/R/site-library/txdbmaker/unitTests/test_makeTxDbFromGFF.R
- /usr/lib/R/site-library/txdbmaker/unitTests/test_makeTxDbFromGRanges.R
- /usr/lib/R/site-library/txdbmaker/unitTests/test_makeTxDbFromUCSC.R
- /usr/share/doc/r-bioc-txdbmaker/changelog.Debian.gz
- /usr/share/doc/r-bioc-txdbmaker/copyright