Package - r-bioc-isoformswitchanalyzer

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-isoformswitchanalyzer/r-bioc-isoformswitchanalyzer_2.6.0+ds-2_amd64.deb (Size: 3.9MiB)

Property	Value
Package	r-bioc-isoformswitchanalyzer
Version	2.6.0+ds-2
Installed-Size	4718
Maintainer	Debian R Packages Maintainers
Architecture	amd64
Depends	r-api-4.0, r-api-bioc-3.20, r-bioc-limma, r-bioc-dexseq, r-bioc-saturn (>= 1.7.0), r-bioc-sva, r-cran-ggplot2 (>= 3.3.5), r-bioc-pfamanalyzer, r-bioc-bsgenome, r-cran-plyr, r-cran-reshape2, r-cran-gridextra, r-bioc-biostrings (>= 2.50.0), r-bioc-iranges, r-bioc-genomicranges, r-cran-rcolorbrewer, r-bioc-rtracklayer, r-cran-venndiagram, r-cran-dbi, r-bioc-genomeinfodb, r-bioc-tximport (>= 1.7.1), r-bioc-tximeta (>= 1.7.12), r-bioc-edger, r-cran-futile.logger, r-cran-stringr, r-cran-dplyr, r-cran-magrittr, r-cran-readr, r-cran-tibble, r-bioc-xvector, r-bioc-biocgenerics, r-cran-rcurl, r-bioc-biobase, r-bioc-summarizedexperiment, r-cran-tidyr, r-bioc-s4vectors, r-bioc-biocparallel, r-bioc-pwalign
Suggests	r-cran-knitr, r-cran-rmarkdown
Description	Identify, Annotate and Visualize Alternative Splicing and
Description-md5	6e336d084c273bc54872e6621a01f875
Homepage	https://bioconductor.org/packages/IsoformSwitchAnalyzeR/
Section	gnu-r
Priority	optional
Filename	pool/main/r/r-bioc-isoformswitchanalyzer/r-bioc-isoformswitchanalyzer_2.6.0+ds-2_amd64.deb
Size	4115212
MD5sum	4c5e45f0169a2435ec0885ccd2f19a5c
SHA256	e8b10e0440bac0fdd0c7c8151b0ca032dbbd05dc8610be5c1fb861fb6e944e56

Files in package

• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/CITATION
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/DESCRIPTION
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/INDEX
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/Rd.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/data.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/features.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/hsearch.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/links.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/nsInfo.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/package.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/vignette.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/NAMESPACE
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/NEWS
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR.rdb
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR.rdx
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/datalist
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchList.RData
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchListAnalyzed.RData
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchListIntermediary.RData
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/IsoformSwitchAnalyzeR.R
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/IsoformSwitchAnalyzeR.Rmd
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/index.html
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/DeepTMHMM.gff3
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/Fibroblasts_0/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/Fibroblasts_1/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/cpat_results.txt
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/cpc2_result.txt
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/deeploc2.csv
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/aux_info/meta_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/cmd_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/aux_info/meta_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/cmd_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/aux_info/meta_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/cmd_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/aux_info/meta_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/cmd_info.json
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/example.gtf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/example_isoform_nt.fasta.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/hESC_0/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/hESC_1/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iPS_0/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iPS_1/quant.sf.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iupred2a_result.txt.gz
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/pfam_results.txt
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/signalP_results.txt
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/AnIndex
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/IsoformSwitchAnalyzeR.rdb
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/IsoformSwitchAnalyzeR.rdx
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/aliases.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/paths.rds
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/html/00Index.html
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/html/R.css
• /usr/lib/R/site-library/IsoformSwitchAnalyzeR/libs/IsoformSwitchAnalyzeR.so
• /usr/share/doc/r-bioc-isoformswitchanalyzer/changelog.Debian.gz
• /usr/share/doc/r-bioc-isoformswitchanalyzer/copyright