Package - r-bioc-gviz

Package:  r-bioc-gviz
apt-get install r-bioc-gviz
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-gviz/r-bioc-gviz_1.50.0+dfsg-2_all.deb (Size: 4.9MiB)

PropertyValue
Packager-bioc-gviz
Version1.50.0+dfsg-2
Installed-Size7003
MaintainerDebian R Packages Maintainers
Architectureall
Dependsr-api-4.0, r-api-bioc-3.20, r-bioc-s4vectors (>= 0.9.25), r-bioc-iranges (>= 1.99.18), r-bioc-genomicranges (>= 1.17.20), r-bioc-xvector (>= 0.5.7), r-bioc-rtracklayer (>= 1.25.13), r-cran-lattice, r-cran-rcolorbrewer, r-bioc-biomart (>= 2.11.0), r-bioc-annotationdbi (>= 1.27.5), r-bioc-biobase (>= 2.15.3), r-bioc-genomicfeatures (>= 1.17.22), r-bioc-ensembldb (>= 2.11.3), r-bioc-bsgenome (>= 1.33.1), r-bioc-biostrings (>= 2.33.11), r-bioc-biovizbase (>= 1.13.8), r-bioc-rsamtools (>= 1.17.28), r-cran-latticeextra (>= 0.6-26), r-cran-matrixstats (>= 0.8.14), r-bioc-genomicalignments (>= 1.1.16), r-bioc-genomeinfodb (>= 1.1.3), r-bioc-biocgenerics (>= 0.11.3), r-cran-digest (>= 0.6.8)
Suggestsr-cran-xml2, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
DescriptionPlotting data and annotation information along genomic coordinates
Description-md5a1192a0bcb8465ef96fce24dbb9e40c0
Homepagehttps://bioconductor.org/packages/Gviz/
Sectiongnu-r
Priorityoptional
Filenamepool/main/r/r-bioc-gviz/r-bioc-gviz_1.50.0+dfsg-2_all.deb
Size5168228
MD5sum029eeceaaa1854df07b39611950b3a3c
SHA256875b10f5eeff1d46afe433790df9a7b5fba6b991c9dcb99752b7e15a0e0a9923

Files in package

  • /usr/lib/R/site-library/Gviz/CITATION
  • /usr/lib/R/site-library/Gviz/DESCRIPTION
  • /usr/lib/R/site-library/Gviz/INDEX
  • /usr/lib/R/site-library/Gviz/Meta/Rd.rds
  • /usr/lib/R/site-library/Gviz/Meta/data.rds
  • /usr/lib/R/site-library/Gviz/Meta/features.rds
  • /usr/lib/R/site-library/Gviz/Meta/hsearch.rds
  • /usr/lib/R/site-library/Gviz/Meta/links.rds
  • /usr/lib/R/site-library/Gviz/Meta/nsInfo.rds
  • /usr/lib/R/site-library/Gviz/Meta/package.rds
  • /usr/lib/R/site-library/Gviz/Meta/vignette.rds
  • /usr/lib/R/site-library/Gviz/NAMESPACE
  • /usr/lib/R/site-library/Gviz/NEWS
  • /usr/lib/R/site-library/Gviz/R/Gviz
  • /usr/lib/R/site-library/Gviz/R/Gviz.rdb
  • /usr/lib/R/site-library/Gviz/R/Gviz.rdx
  • /usr/lib/R/site-library/Gviz/data/alTrackGenes.rda
  • /usr/lib/R/site-library/Gviz/data/biomTrack.rda
  • /usr/lib/R/site-library/Gviz/data/biomTrack2.rda
  • /usr/lib/R/site-library/Gviz/data/bmTrack.rda
  • /usr/lib/R/site-library/Gviz/data/collapseTrack.rda
  • /usr/lib/R/site-library/Gviz/data/cpgIslands.rda
  • /usr/lib/R/site-library/Gviz/data/cyp2b10.rda
  • /usr/lib/R/site-library/Gviz/data/denseAnnTrack.rda
  • /usr/lib/R/site-library/Gviz/data/dtHoriz.rda
  • /usr/lib/R/site-library/Gviz/data/geneDetails.rda
  • /usr/lib/R/site-library/Gviz/data/geneModels.rda
  • /usr/lib/R/site-library/Gviz/data/idTrack.rda
  • /usr/lib/R/site-library/Gviz/data/ideoTrack.rda
  • /usr/lib/R/site-library/Gviz/data/itrack.rda
  • /usr/lib/R/site-library/Gviz/data/twoGroups.rda
  • /usr/lib/R/site-library/Gviz/data/ucscItems.rda
  • /usr/lib/R/site-library/Gviz/doc/Gviz.R
  • /usr/lib/R/site-library/Gviz/doc/Gviz.Rmd
  • /usr/lib/R/site-library/Gviz/doc/index.html
  • /usr/lib/R/site-library/Gviz/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam
  • /usr/lib/R/site-library/Gviz/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam
  • /usr/lib/R/site-library/Gviz/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/biomartVersionsLatest.txt
  • /usr/lib/R/site-library/Gviz/extdata/biomartVersionsNow.txt
  • /usr/lib/R/site-library/Gviz/extdata/gapped.bam
  • /usr/lib/R/site-library/Gviz/extdata/gapped.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/indels.bam
  • /usr/lib/R/site-library/Gviz/extdata/indels.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/snps.bam
  • /usr/lib/R/site-library/Gviz/extdata/snps.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/test.2bit
  • /usr/lib/R/site-library/Gviz/extdata/test.bam
  • /usr/lib/R/site-library/Gviz/extdata/test.bam.bai
  • /usr/lib/R/site-library/Gviz/extdata/test.bed
  • /usr/lib/R/site-library/Gviz/extdata/test.bedGraph
  • /usr/lib/R/site-library/Gviz/extdata/test.bw
  • /usr/lib/R/site-library/Gviz/extdata/test.fa
  • /usr/lib/R/site-library/Gviz/extdata/test.fa.fai
  • /usr/lib/R/site-library/Gviz/extdata/test.gff
  • /usr/lib/R/site-library/Gviz/extdata/test.gff1
  • /usr/lib/R/site-library/Gviz/extdata/test.gff2
  • /usr/lib/R/site-library/Gviz/extdata/test.gff3
  • /usr/lib/R/site-library/Gviz/extdata/test.gtf
  • /usr/lib/R/site-library/Gviz/extdata/test.wig
  • /usr/lib/R/site-library/Gviz/help/AnIndex
  • /usr/lib/R/site-library/Gviz/help/Gviz.rdb
  • /usr/lib/R/site-library/Gviz/help/Gviz.rdx
  • /usr/lib/R/site-library/Gviz/help/aliases.rds
  • /usr/lib/R/site-library/Gviz/help/paths.rds
  • /usr/lib/R/site-library/Gviz/html/00Index.html
  • /usr/lib/R/site-library/Gviz/html/R.css
  • /usr/lib/R/site-library/Gviz/scripts/documentation.R
  • /usr/lib/R/site-library/Gviz/scripts/testBiomartGenomeMappings.R
  • /usr/lib/R/site-library/Gviz/scripts/updateBiomartGenomeMappings.R
  • /usr/share/doc/r-bioc-gviz/changelog.Debian.gz
  • /usr/share/doc/r-bioc-gviz/copyright
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-example.png
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-logo.png
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-refs.bib
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz.Rmd
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/ucsc1.png
  • /usr/share/doc/r-bioc-gviz/examples/vignettes/ucsc2.png