Package - r-bioc-ensembldb
Primary informations
Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-ensembldb/r-bioc-ensembldb_2.30.0+dfsg-3_all.deb (Size: 1.4MiB)| Property | Value |
|---|---|
| Package | r-bioc-ensembldb |
| Version | 2.30.0+dfsg-3 |
| Installed-Size | 2343 |
| Maintainer | Debian R Packages Maintainers |
| Architecture | all |
| Depends | r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.15.10), r-bioc-genomicranges (>= 1.31.18), r-bioc-genomicfeatures (>= 1.49.6), r-bioc-annotationfilter (>= 1.5.2), r-cran-rsqlite (>= 1.1), r-cran-dbi, r-bioc-biobase, r-bioc-genomeinfodb, r-bioc-annotationdbi (>= 1.31.19), r-bioc-rtracklayer, r-bioc-s4vectors (>= 0.23.10), r-bioc-rsamtools, r-bioc-iranges (>= 2.13.24), r-bioc-protgenerics, r-bioc-biostrings (>= 2.47.9), r-cran-curl |
| Suggests | r-bioc-biocstyle, r-cran-knitr, r-cran-testthat, r-bioc-ggbio (>= 1.24.0), r-bioc-gviz (>= 1.20.0), r-cran-rmarkdown, r-bioc-annotationhub |
| Description | GNU R utilities to create and use an Ensembl based annotation database |
| Description-md5 | 8193c0347bf158b238c1f1ab9ad7a963 |
| Homepage | https://bioconductor.org/packages/ensembldb/ |
| Section | gnu-r |
| Priority | optional |
| Filename | pool/main/r/r-bioc-ensembldb/r-bioc-ensembldb_2.30.0+dfsg-3_all.deb |
| Size | 1509952 |
| MD5sum | 696153b613fb261bbe4ca8d0473c36de |
| SHA256 | 31df850b3a912cfff4945d36bddf73cccf1ea6ec85b2883e181ae4495e406dbd |
Files in package
- /usr/lib/R/site-library/ensembldb/CITATION
- /usr/lib/R/site-library/ensembldb/DESCRIPTION
- /usr/lib/R/site-library/ensembldb/INDEX
- /usr/lib/R/site-library/ensembldb/Meta/Rd.rds
- /usr/lib/R/site-library/ensembldb/Meta/features.rds
- /usr/lib/R/site-library/ensembldb/Meta/hsearch.rds
- /usr/lib/R/site-library/ensembldb/Meta/links.rds
- /usr/lib/R/site-library/ensembldb/Meta/nsInfo.rds
- /usr/lib/R/site-library/ensembldb/Meta/package.rds
- /usr/lib/R/site-library/ensembldb/Meta/vignette.rds
- /usr/lib/R/site-library/ensembldb/NAMESPACE
- /usr/lib/R/site-library/ensembldb/NEWS
- /usr/lib/R/site-library/ensembldb/R/ensembldb
- /usr/lib/R/site-library/ensembldb/R/ensembldb.rdb
- /usr/lib/R/site-library/ensembldb/R/ensembldb.rdx
- /usr/lib/R/site-library/ensembldb/YGRanges.RData
- /usr/lib/R/site-library/ensembldb/chrY/ens_chromosome.txt
- /usr/lib/R/site-library/ensembldb/chrY/ens_exon.txt
- /usr/lib/R/site-library/ensembldb/chrY/ens_gene.txt
- /usr/lib/R/site-library/ensembldb/chrY/ens_metadata.txt
- /usr/lib/R/site-library/ensembldb/chrY/ens_tx.txt
- /usr/lib/R/site-library/ensembldb/chrY/ens_tx2exon.txt
- /usr/lib/R/site-library/ensembldb/doc/MySQL-backend.R
- /usr/lib/R/site-library/ensembldb/doc/MySQL-backend.Rmd
- /usr/lib/R/site-library/ensembldb/doc/coordinate-mapping-use-cases.R
- /usr/lib/R/site-library/ensembldb/doc/coordinate-mapping-use-cases.Rmd
- /usr/lib/R/site-library/ensembldb/doc/coordinate-mapping.R
- /usr/lib/R/site-library/ensembldb/doc/coordinate-mapping.Rmd
- /usr/lib/R/site-library/ensembldb/doc/ensembldb.R
- /usr/lib/R/site-library/ensembldb/doc/ensembldb.Rmd
- /usr/lib/R/site-library/ensembldb/doc/index.html
- /usr/lib/R/site-library/ensembldb/doc/proteins.R
- /usr/lib/R/site-library/ensembldb/doc/proteins.Rmd
- /usr/lib/R/site-library/ensembldb/extended_tests/extended_tests.R
- /usr/lib/R/site-library/ensembldb/extended_tests/performance_tests.R
- /usr/lib/R/site-library/ensembldb/gff/Devosia_geojensis.ASM96941v1.32.gff3.gz
- /usr/lib/R/site-library/ensembldb/gtf/Devosia_geojensis.ASM96941v1.32.gtf.gz
- /usr/lib/R/site-library/ensembldb/help/AnIndex
- /usr/lib/R/site-library/ensembldb/help/aliases.rds
- /usr/lib/R/site-library/ensembldb/help/ensembldb.rdb
- /usr/lib/R/site-library/ensembldb/help/ensembldb.rdx
- /usr/lib/R/site-library/ensembldb/help/paths.rds
- /usr/lib/R/site-library/ensembldb/html/00Index.html
- /usr/lib/R/site-library/ensembldb/html/R.css
- /usr/lib/R/site-library/ensembldb/perl/get_gene_transcript_exon_tables.pl
- /usr/lib/R/site-library/ensembldb/perl/test_script.pl
- /usr/lib/R/site-library/ensembldb/pkg-template/DESCRIPTION
- /usr/lib/R/site-library/ensembldb/pkg-template/NAMESPACE
- /usr/lib/R/site-library/ensembldb/pkg-template/R/zzz.R
- /usr/lib/R/site-library/ensembldb/pkg-template/man/package.Rd
- /usr/lib/R/site-library/ensembldb/scripts/checkEnsDbs.R
- /usr/lib/R/site-library/ensembldb/scripts/evaluate_gc_content.Rmd
- /usr/lib/R/site-library/ensembldb/scripts/generate-EnsDBs.R
- /usr/lib/R/site-library/ensembldb/shinyHappyPeople/server.R
- /usr/lib/R/site-library/ensembldb/shinyHappyPeople/ui.R
- /usr/lib/R/site-library/ensembldb/txt/ENST00000200135.fa.gz
- /usr/lib/R/site-library/ensembldb/txt/ENST00000335953.fa.gz
- /usr/share/doc/r-bioc-ensembldb/changelog.Debian.gz
- /usr/share/doc/r-bioc-ensembldb/copyright