Package - r-bioc-dada2

Package:  r-bioc-dada2
apt-get install r-bioc-dada2
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-dada2/r-bioc-dada2_1.34.0+dfsg-2_amd64.deb (Size: 2.7MiB)

PropertyValue
Packager-bioc-dada2
Version1.34.0+dfsg-2
Installed-Size3153
MaintainerDebian R Packages Maintainers
Architectureamd64
Dependsr-api-4.0, r-api-bioc-3.20, r-cran-rcpp (>= 0.12.0), r-bioc-biostrings (>= 2.42.1), r-cran-ggplot2 (>= 2.1.0), r-cran-reshape2 (>= 1.4.1), r-bioc-shortread (>= 1.32.0), r-cran-rcppparallel (>= 4.3.0), r-bioc-iranges (>= 2.6.0), r-bioc-xvector (>= 0.16.0), r-bioc-biocgenerics (>= 0.22.0), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 14), libtbb12 (>= 2022.0.0)
Suggestsr-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown
Descriptionsample inference from amplicon sequencing data
Description-md53fa0d6dceb2f30972ee5a7c11349bf26
Homepagehttps://bioconductor.org/packages/dada2/
Sectiongnu-r
Priorityoptional
Filenamepool/main/r/r-bioc-dada2/r-bioc-dada2_1.34.0+dfsg-2_amd64.deb
Size2812152
MD5sume82cc037dbd19d944e7166ca315531d2
SHA256b776682dd85bffcaf60c48944ab16f2e5624fdc919763c700357cfaa606a9742

Files in package

  • /usr/lib/R/site-library/dada2/CITATION
  • /usr/lib/R/site-library/dada2/DESCRIPTION
  • /usr/lib/R/site-library/dada2/INDEX
  • /usr/lib/R/site-library/dada2/Meta/Rd.rds
  • /usr/lib/R/site-library/dada2/Meta/data.rds
  • /usr/lib/R/site-library/dada2/Meta/features.rds
  • /usr/lib/R/site-library/dada2/Meta/hsearch.rds
  • /usr/lib/R/site-library/dada2/Meta/links.rds
  • /usr/lib/R/site-library/dada2/Meta/nsInfo.rds
  • /usr/lib/R/site-library/dada2/Meta/package.rds
  • /usr/lib/R/site-library/dada2/Meta/vignette.rds
  • /usr/lib/R/site-library/dada2/NAMESPACE
  • /usr/lib/R/site-library/dada2/NEWS
  • /usr/lib/R/site-library/dada2/R/dada2
  • /usr/lib/R/site-library/dada2/R/dada2.rdb
  • /usr/lib/R/site-library/dada2/R/dada2.rdx
  • /usr/lib/R/site-library/dada2/data/Rdata.rdb
  • /usr/lib/R/site-library/dada2/data/Rdata.rds
  • /usr/lib/R/site-library/dada2/data/Rdata.rdx
  • /usr/lib/R/site-library/dada2/doc/dada2-intro.R
  • /usr/lib/R/site-library/dada2/doc/dada2-intro.Rmd
  • /usr/lib/R/site-library/dada2/doc/index.html
  • /usr/lib/R/site-library/dada2/extdata/example_seqs.fa
  • /usr/lib/R/site-library/dada2/extdata/example_species_assignment.fa.gz
  • /usr/lib/R/site-library/dada2/extdata/example_train_set.fa.gz
  • /usr/lib/R/site-library/dada2/extdata/phix_genome.fa
  • /usr/lib/R/site-library/dada2/extdata/sam1F.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam1R.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam2F.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam2R.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/samPB.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/samPBprimers.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/ten_16s.100.fa.gz
  • /usr/lib/R/site-library/dada2/help/AnIndex
  • /usr/lib/R/site-library/dada2/help/aliases.rds
  • /usr/lib/R/site-library/dada2/help/dada2.rdb
  • /usr/lib/R/site-library/dada2/help/dada2.rdx
  • /usr/lib/R/site-library/dada2/help/paths.rds
  • /usr/lib/R/site-library/dada2/html/00Index.html
  • /usr/lib/R/site-library/dada2/html/R.css
  • /usr/lib/R/site-library/dada2/include/dada2.h
  • /usr/lib/R/site-library/dada2/include/dada2_RcppExports.h
  • /usr/lib/R/site-library/dada2/libs/dada2.so
  • /usr/share/doc/r-bioc-dada2/changelog.Debian.gz
  • /usr/share/doc/r-bioc-dada2/copyright
  • /usr/share/lintian/overrides/r-bioc-dada2