Package - r-bioc-cner

Package:  r-bioc-cner
apt-get install r-bioc-cner
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-cner/r-bioc-cner_1.42.0+dfsg-3_amd64.deb (Size: 8.0MiB)

PropertyValue
Packager-bioc-cner
Version1.42.0+dfsg-3
Installed-Size17987
MaintainerDebian R Packages Maintainers
Architectureamd64
Dependsr-api-4.0, r-api-bioc-3.20, r-bioc-biostrings (>= 2.33.4), r-bioc-pwalign, r-cran-dbi (>= 0.7), r-cran-rsqlite (>= 0.11.4), r-bioc-genomeinfodb (>= 1.1.3), r-bioc-genomicranges (>= 1.23.16), r-bioc-rtracklayer (>= 1.25.5), r-bioc-xvector (>= 0.5.4), r-bioc-genomicalignments (>= 1.1.9), r-bioc-s4vectors (>= 0.13.13), r-bioc-iranges (>= 2.5.27), r-cran-readr (>= 0.2.2), r-bioc-biocgenerics, r-cran-reshape2 (>= 1.4.1), r-cran-ggplot2 (>= 2.1.0), r-cran-powerlaw (>= 0.60.3), r-bioc-annotate (>= 1.50.0), r-bioc-go.db (>= 3.3.0), r-cran-r.utils (>= 2.3.0), r-bioc-keggrest (>= 1.14.0), libc6 (>= 2.38)
Suggestsr-bioc-gviz (>= 1.7.4), r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
DescriptionCNE Detection and Visualization
Description-md57eb745510870e4e5f5cabb41a8e73fdc
Homepagehttps://bioconductor.org/packages/CNEr/
Sectiongnu-r
Priorityoptional
Filenamepool/main/r/r-bioc-cner/r-bioc-cner_1.42.0+dfsg-3_amd64.deb
Size8415332
MD5sume265418f03c9d98666b6d0b062353fef
SHA25681d947d381ca6cfd94eb810120d527c9446020c8f820031fc9b3461c2506d6bc

Files in package

  • /usr/lib/R/site-library/CNEr/CITATION
  • /usr/lib/R/site-library/CNEr/DESCRIPTION
  • /usr/lib/R/site-library/CNEr/INDEX
  • /usr/lib/R/site-library/CNEr/Meta/Rd.rds
  • /usr/lib/R/site-library/CNEr/Meta/data.rds
  • /usr/lib/R/site-library/CNEr/Meta/features.rds
  • /usr/lib/R/site-library/CNEr/Meta/hsearch.rds
  • /usr/lib/R/site-library/CNEr/Meta/links.rds
  • /usr/lib/R/site-library/CNEr/Meta/nsInfo.rds
  • /usr/lib/R/site-library/CNEr/Meta/package.rds
  • /usr/lib/R/site-library/CNEr/Meta/vignette.rds
  • /usr/lib/R/site-library/CNEr/NAMESPACE
  • /usr/lib/R/site-library/CNEr/NEWS
  • /usr/lib/R/site-library/CNEr/R/CNEr
  • /usr/lib/R/site-library/CNEr/R/CNEr.rdb
  • /usr/lib/R/site-library/CNEr/R/CNEr.rdx
  • /usr/lib/R/site-library/CNEr/data/CNEDanRer10Hg38.rda
  • /usr/lib/R/site-library/CNEr/data/CNEHg38DanRer10.rda
  • /usr/lib/R/site-library/CNEr/data/axisTrack.rda
  • /usr/lib/R/site-library/CNEr/data/cneFinalListDanRer10Hg38.rda
  • /usr/lib/R/site-library/CNEr/data/cpgIslands.rda
  • /usr/lib/R/site-library/CNEr/data/grangesPairsForDotplot.rda
  • /usr/lib/R/site-library/CNEr/data/refGenes.rda
  • /usr/lib/R/site-library/CNEr/doc/CNEr.R
  • /usr/lib/R/site-library/CNEr/doc/CNEr.Rmd
  • /usr/lib/R/site-library/CNEr/doc/PairwiseWholeGenomeAlignment.R
  • /usr/lib/R/site-library/CNEr/doc/PairwiseWholeGenomeAlignment.Rmd
  • /usr/lib/R/site-library/CNEr/doc/index.html
  • /usr/lib/R/site-library/CNEr/extdata/chr4.hg19.galGal3.net.axt.gz
  • /usr/lib/R/site-library/CNEr/extdata/cne2wBf_AstMex102_danRer10_48_50
  • /usr/lib/R/site-library/CNEr/extdata/cne2wBf_cteIde1_danRer10_100_100
  • /usr/lib/R/site-library/CNEr/extdata/cne2wBf_cypCar1_danRer10_100_100
  • /usr/lib/R/site-library/CNEr/extdata/cne2wBf_danRer10_hg38_45_50
  • /usr/lib/R/site-library/CNEr/extdata/danRer10.hg38.net.axt
  • /usr/lib/R/site-library/CNEr/extdata/danRer10CNE.sqlite
  • /usr/lib/R/site-library/CNEr/extdata/filter_regions.danRer10.bed
  • /usr/lib/R/site-library/CNEr/extdata/filter_regions.hg38.bed
  • /usr/lib/R/site-library/CNEr/extdata/hg38.danRer10.net.axt
  • /usr/lib/R/site-library/CNEr/extdata/rmsk.fa
  • /usr/lib/R/site-library/CNEr/help/AnIndex
  • /usr/lib/R/site-library/CNEr/help/CNEr.rdb
  • /usr/lib/R/site-library/CNEr/help/CNEr.rdx
  • /usr/lib/R/site-library/CNEr/help/aliases.rds
  • /usr/lib/R/site-library/CNEr/help/paths.rds
  • /usr/lib/R/site-library/CNEr/html/00Index.html
  • /usr/lib/R/site-library/CNEr/html/R.css
  • /usr/lib/R/site-library/CNEr/libs/CNEr.so
  • /usr/lib/R/site-library/CNEr/obsolete/CNEr.Rnw
  • /usr/lib/R/site-library/CNEr/obsolete/alignment.c
  • /usr/lib/R/site-library/CNEr/obsolete/ceScan.r
  • /usr/lib/R/site-library/CNEr/obsolete/ceScanR.r
  • /usr/lib/R/site-library/CNEr/obsolete/class.r
  • /usr/lib/R/site-library/CNEr/obsolete/src/ceScan.c
  • /usr/lib/R/site-library/CNEr/obsolete/src/ceScanBranch1.c
  • /usr/lib/R/site-library/CNEr/obsolete/src/ceScanBranch2.c
  • /usr/lib/R/site-library/CNEr/obsolete/src/compile
  • /usr/lib/R/site-library/CNEr/scripts/danRer10Pipeline.R
  • /usr/lib/R/site-library/CNEr/scripts/prepareData.R
  • /usr/share/doc/r-bioc-cner/changelog.Debian.gz
  • /usr/share/doc/r-bioc-cner/copyright