Package - r-bioc-bsseq

Package:  r-bioc-bsseq
apt-get install r-bioc-bsseq
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/r/r-bioc-bsseq/r-bioc-bsseq_1.42.0+dfsg-2_amd64.deb (Size: 2.9MiB)

PropertyValue
Packager-bioc-bsseq
Version1.42.0+dfsg-2
Installed-Size3597
MaintainerDebian R Packages Maintainers
Architectureamd64
Dependsr-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics, r-bioc-genomicranges (>= 1.41.5), r-bioc-summarizedexperiment (>= 1.19.5), r-bioc-iranges (>= 2.23.9), r-bioc-genomeinfodb, r-cran-scales, r-bioc-biobase, r-cran-locfit, r-cran-gtools, r-cran-data.table (>= 1.11.8), r-bioc-s4vectors (>= 0.27.12), r-cran-r.utils (>= 2.0.0), r-bioc-delayedmatrixstats (>= 1.5.2), r-cran-permute, r-bioc-limma, r-bioc-delayedarray (>= 0.15.16), r-cran-rcpp, r-bioc-biocparallel, r-bioc-bsgenome, r-bioc-biostrings, r-bioc-hdf5array (>= 1.19.11), r-bioc-rhdf5, r-bioc-beachmat, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1)
Suggestsr-cran-testthat, r-bioc-biocstyle, r-cran-rmarkdown, r-cran-knitr, r-cran-matrix, r-cran-doparallel, r-bioc-rtracklayer, r-bioc-beachmat (>= 1.5.2), r-cran-batchtools
DescriptionBioconductor analyze, manage and store bisulfite sequencing data
Description-md5180b48f012fc46f936094bed692669d0
Homepagehttps://bioconductor.org/packages/bsseq/
Sectiongnu-r
Priorityoptional
Filenamepool/main/r/r-bioc-bsseq/r-bioc-bsseq_1.42.0+dfsg-2_amd64.deb
Size3056952
MD5sum7ef452939550199b2eb51b24fcffe7e5
SHA256a0f92145214c6365e30d26b1e8ff60eae43daa2f3dbe40ea7ffc4612532a94fe

Files in package

  • /usr/lib/R/site-library/bsseq/CITATION
  • /usr/lib/R/site-library/bsseq/DESCRIPTION
  • /usr/lib/R/site-library/bsseq/INDEX
  • /usr/lib/R/site-library/bsseq/Meta/Rd.rds
  • /usr/lib/R/site-library/bsseq/Meta/data.rds
  • /usr/lib/R/site-library/bsseq/Meta/features.rds
  • /usr/lib/R/site-library/bsseq/Meta/hsearch.rds
  • /usr/lib/R/site-library/bsseq/Meta/links.rds
  • /usr/lib/R/site-library/bsseq/Meta/nsInfo.rds
  • /usr/lib/R/site-library/bsseq/Meta/package.rds
  • /usr/lib/R/site-library/bsseq/Meta/vignette.rds
  • /usr/lib/R/site-library/bsseq/NAMESPACE
  • /usr/lib/R/site-library/bsseq/NEWS.Rd
  • /usr/lib/R/site-library/bsseq/R/bsseq
  • /usr/lib/R/site-library/bsseq/R/bsseq.rdb
  • /usr/lib/R/site-library/bsseq/R/bsseq.rdx
  • /usr/lib/R/site-library/bsseq/data/BS.chr22.rda
  • /usr/lib/R/site-library/bsseq/data/datalist
  • /usr/lib/R/site-library/bsseq/doc/bsseq.R
  • /usr/lib/R/site-library/bsseq/doc/bsseq.Rmd
  • /usr/lib/R/site-library/bsseq/doc/bsseq_analysis.R
  • /usr/lib/R/site-library/bsseq/doc/bsseq_analysis.Rmd
  • /usr/lib/R/site-library/bsseq/doc/index.html
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/ctr1.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/ctr2.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/ctr3.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/tret1.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/tret2.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modbam2bed/tret3.chr10.chr11.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/modkit/Hypo1.first50Bed.txt
  • /usr/lib/R/site-library/bsseq/extdata/modkit/chr21.chr22.HG002.top1000.bed.gz
  • /usr/lib/R/site-library/bsseq/extdata/test_data.cytosineReport.gz
  • /usr/lib/R/site-library/bsseq/extdata/test_data.fastq_bismark.bismark.cov.gz
  • /usr/lib/R/site-library/bsseq/help/AnIndex
  • /usr/lib/R/site-library/bsseq/help/aliases.rds
  • /usr/lib/R/site-library/bsseq/help/bsseq.rdb
  • /usr/lib/R/site-library/bsseq/help/bsseq.rdx
  • /usr/lib/R/site-library/bsseq/help/paths.rds
  • /usr/lib/R/site-library/bsseq/html/00Index.html
  • /usr/lib/R/site-library/bsseq/html/R.css
  • /usr/lib/R/site-library/bsseq/libs/bsseq.so
  • /usr/lib/R/site-library/bsseq/scripts/get_BS.chr22.R
  • /usr/share/doc/r-bioc-bsseq/changelog.Debian.gz
  • /usr/share/doc/r-bioc-bsseq/copyright