Package - python3-pairtools

Package:  python3-pairtools
apt-get install python3-pairtools
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/p/pairtools/python3-pairtools_1.1.3-1+b1_amd64.deb (Size: 202.2KiB)

PropertyValue
Packagepython3-pairtools
Sourcepairtools (1.1.3-1)
Version1.1.3-1+b1
Installed-Size833
MaintainerDebian Med Packaging Team
Architectureamd64
Dependspython3-standard-pipes, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), python3 (<< 3.14), python3 (>= 3.13~), python3-bioframe, python3-click, python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3-pandas, python3-pysam (>= 0.20.0+ds-3~), python3-scipy, python3-yaml, python3:any
Suggestspython3-pairtools-examples (>= 1.0.2)
DescriptionFramework to process sequencing data from a Hi-C experiment
Description-md5a340132b5467a45fa9b90e04ece3e5c1
Homepagehttps://github.com/mirnylab/pairtools
Sectionpython
Priorityoptional
Filenamepool/main/p/pairtools/python3-pairtools_1.1.3-1+b1_amd64.deb
Size207068
MD5sum69eb3c6e74046d498e5aef47f8106f33
SHA256413bfb5ff113c99270df2798fb8b32782b7627157892fc057e223d414550e9ce

Files in package

  • /usr/bin/pairtools
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/INSTALLER
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/METADATA
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/WHEEL
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/entry_points.txt
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/top_level.txt
  • /usr/lib/python3/dist-packages/pairtools/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/__main__.py
  • /usr/lib/python3/dist-packages/pairtools/_logging.py
  • /usr/lib/python3/dist-packages/pairtools/cli/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/cli/dedup.py
  • /usr/lib/python3/dist-packages/pairtools/cli/filterbycov.py
  • /usr/lib/python3/dist-packages/pairtools/cli/flip.py
  • /usr/lib/python3/dist-packages/pairtools/cli/header.py
  • /usr/lib/python3/dist-packages/pairtools/cli/markasdup.py
  • /usr/lib/python3/dist-packages/pairtools/cli/merge.py
  • /usr/lib/python3/dist-packages/pairtools/cli/parse.py
  • /usr/lib/python3/dist-packages/pairtools/cli/parse2.py
  • /usr/lib/python3/dist-packages/pairtools/cli/phase.py
  • /usr/lib/python3/dist-packages/pairtools/cli/restrict.py
  • /usr/lib/python3/dist-packages/pairtools/cli/sample.py
  • /usr/lib/python3/dist-packages/pairtools/cli/scaling.py
  • /usr/lib/python3/dist-packages/pairtools/cli/select.py
  • /usr/lib/python3/dist-packages/pairtools/cli/sort.py
  • /usr/lib/python3/dist-packages/pairtools/cli/split.py
  • /usr/lib/python3/dist-packages/pairtools/cli/stats.py
  • /usr/lib/python3/dist-packages/pairtools/lib/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup.py
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/fileio.py
  • /usr/lib/python3/dist-packages/pairtools/lib/filterbycov.py
  • /usr/lib/python3/dist-packages/pairtools/lib/headerops.py
  • /usr/lib/python3/dist-packages/pairtools/lib/pairsam_format.py
  • /usr/lib/python3/dist-packages/pairtools/lib/pairsio.py
  • /usr/lib/python3/dist-packages/pairtools/lib/parse.py
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pxd
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/phase.py
  • /usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/regions.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/restrict.py
  • /usr/lib/python3/dist-packages/pairtools/lib/scaling.py
  • /usr/lib/python3/dist-packages/pairtools/lib/select.py
  • /usr/lib/python3/dist-packages/pairtools/lib/stats.py
  • /usr/share/doc/python3-pairtools/README.test
  • /usr/share/doc/python3-pairtools/changelog.Debian.amd64.gz
  • /usr/share/doc/python3-pairtools/changelog.Debian.gz
  • /usr/share/doc/python3-pairtools/changelog.gz
  • /usr/share/doc/python3-pairtools/copyright