Package - nanosv

Package:  nanosv
apt-get install nanosv
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/n/nanosv/nanosv_1.2.4+git20190409.c1ae30c-7_all.deb (Size: 2.7MiB)

PropertyValue
Packagenanosv
Version1.2.4+git20190409.c1ae30c-7
Installed-Size20558
MaintainerDebian Med Packaging Team
Architectureall
Dependspython3-pysam, python3-vcf, python3:any
Recommendssambamba
Descriptionstructural variant caller for nanopore data
Description-md57f9382ae1325c01d058025b24184dcc0
Homepagehttps://github.com/mroosmalen/nanosv
Sectionscience
Priorityoptional
Filenamepool/main/n/nanosv/nanosv_1.2.4+git20190409.c1ae30c-7_all.deb
Size2872372
MD5sum8e9789f10485ccccbcbb8750c5c6cc86
SHA2568ead774020939c3aeee36a07c86950a82fa6d970f57641c8a182bd245ca269bd

Files in package

  • /usr/bin/NanoSV
  • /usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/PKG-INFO
  • /usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/dependency_links.txt
  • /usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/entry_points.txt
  • /usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/requires.txt
  • /usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/top_level.txt
  • /usr/lib/python3/dist-packages/nanosv/NanoSV.py
  • /usr/lib/python3/dist-packages/nanosv/__init__.py
  • /usr/lib/python3/dist-packages/nanosv/bedfiles/human_hg19.bed
  • /usr/lib/python3/dist-packages/nanosv/classes/__init__.py
  • /usr/lib/python3/dist-packages/nanosv/classes/breakpoint.py
  • /usr/lib/python3/dist-packages/nanosv/classes/read.py
  • /usr/lib/python3/dist-packages/nanosv/classes/segment.py
  • /usr/lib/python3/dist-packages/nanosv/classes/sv.py
  • /usr/lib/python3/dist-packages/nanosv/classes/variant.py
  • /usr/lib/python3/dist-packages/nanosv/config.ini
  • /usr/lib/python3/dist-packages/nanosv/utils/__init__.py
  • /usr/lib/python3/dist-packages/nanosv/utils/coverage.py
  • /usr/lib/python3/dist-packages/nanosv/utils/create_vcf.py
  • /usr/lib/python3/dist-packages/nanosv/utils/parse_bam.py
  • /usr/lib/python3/dist-packages/nanosv/utils/parse_breakpoints.py
  • /usr/lib/python3/dist-packages/nanosv/utils/parse_reads.py
  • /usr/lib/python3/dist-packages/nanosv/utils/parse_svs.py
  • /usr/lib/python3/dist-packages/nanosv/utils/phasing.py
  • /usr/lib/python3/dist-packages/nanosv/version.py
  • /usr/share/doc/nanosv/README.md.gz
  • /usr/share/doc/nanosv/README.test
  • /usr/share/doc/nanosv/changelog.Debian.gz
  • /usr/share/doc/nanosv/copyright
  • /usr/share/doc/nanosv/run-unit-test
  • /usr/share/man/man1/NanoSV.1.gz