Package - mapdamage

Package:  mapdamage
apt-get install mapdamage
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/m/mapdamage/mapdamage_2.2.2+dfsg-1_all.deb (Size: 41.1KiB)

PropertyValue
Packagemapdamage
Version2.2.2+dfsg-1
Installed-Size192
MaintainerDebian Med Packaging Team
Architectureall
Dependspython3:any, r-base-core, r-cran-gam, r-cran-ggplot2, r-cran-inline, seqtk, python3-pysam, r-cran-rcpp, r-cran-rcppgsl, libopenblas-dev | libblas-dev | libatlas-base-dev | libblas.so, libopenblas-dev | liblapack-dev | libatlas-base-dev | liblapack.so
Descriptiontracking and quantifying damage patterns in ancient DNA sequences
Description-md512a591215e4baf8b82a558bce253c33a
Homepagehttps://ginolhac.github.io/mapDamage/
Sectionscience
Priorityoptional
Filenamepool/main/m/mapdamage/mapdamage_2.2.2+dfsg-1_all.deb
Size42136
MD5sumab47b0e4c159c5e39be76de9af28bddf
SHA2566df9312cf37e55cc255268766117d9bbb1eb25b72624c11455056ed9beb50b57

Files in package

  • /usr/bin/mapDamage
  • /usr/lib/python3/dist-packages/mapdamage-2.2.2.egg-info/PKG-INFO
  • /usr/lib/python3/dist-packages/mapdamage-2.2.2.egg-info/dependency_links.txt
  • /usr/lib/python3/dist-packages/mapdamage-2.2.2.egg-info/top_level.txt
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/lengths.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/mapDamage.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/checkLibraries.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/data.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/function.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/main.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/postConditonal.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/priorPropose.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/runGeneral.R
  • /usr/lib/python3/dist-packages/mapdamage/Rscripts/stats/start.R
  • /usr/lib/python3/dist-packages/mapdamage/__init__.py
  • /usr/lib/python3/dist-packages/mapdamage/align.py
  • /usr/lib/python3/dist-packages/mapdamage/composition.py
  • /usr/lib/python3/dist-packages/mapdamage/mp_test.py
  • /usr/lib/python3/dist-packages/mapdamage/parseoptions.py
  • /usr/lib/python3/dist-packages/mapdamage/rescale.py
  • /usr/lib/python3/dist-packages/mapdamage/rscript.py
  • /usr/lib/python3/dist-packages/mapdamage/seq.py
  • /usr/lib/python3/dist-packages/mapdamage/tables.py
  • /usr/lib/python3/dist-packages/mapdamage/tests/dnacomp.txt
  • /usr/lib/python3/dist-packages/mapdamage/tests/fake1.fasta
  • /usr/lib/python3/dist-packages/mapdamage/tests/fake1.fasta.fai
  • /usr/lib/python3/dist-packages/mapdamage/tests/probs/Stats_out_MCMC_correct_prob.csv
  • /usr/lib/python3/dist-packages/mapdamage/tests/test.bam
  • /usr/lib/python3/dist-packages/mapdamage/tests/test.rescaled.correct.sam
  • /usr/lib/python3/dist-packages/mapdamage/tests/test.rescaled.sam
  • /usr/lib/python3/dist-packages/mapdamage/version.py
  • /usr/share/doc/mapdamage/README.test
  • /usr/share/doc/mapdamage/changelog.Debian.gz
  • /usr/share/doc/mapdamage/copyright
  • /usr/share/doc/mapdamage/run-r-packages-check
  • /usr/share/doc/mapdamage/run-unit-test
  • /usr/share/man/man1/mapDamage.1.gz